Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1504 ATGGGACTACGTAAATTGAGAGCAAAGATTAAAAGGAGCCATCTTTACACGTTTGCTTGTCTTAGGCGGAGTGACACTACGCAGGAGAATCCTCATAACCTTCAAGGTCCTGGTTTTTCAAGAATTGTACATTGCAACCACTCTAATCTCCATGAAAAGAAATCTCTATTTTACTGCAGGAATGACATATCAACTACAAAATACAATGTTATTACCTTTTTGCCTAAGGCACTCTTTGAGCAATTTCGAAGGGTTGCTAATATATACTTCCTCGTGGCTGCGTGCCTCTCAGCTTCTCCAATCTCACCATTCTCTCCACTGAGCATGATTGCTCCTTTGGCATTTGTCGTTGGGCTCAGTATGGCAAAGGAAGCATTGGAAGACTGGCGCAGGTTTCGTCAGGATCTCAAAGTTAATCACCGGAAAGCTGGCGTCCATAAAGACAATGGTGTTTTTCATCTCAAGCAATGGCAGGACATTATGGTTGGGGATGTGGTAAAAGTAGATAAGGATCAGTTTTTTCCTGCTGATTTGCTTTTCTTGTCATCAAGTTATGAGGATGGGATATGCTATGTGGAAACTATGAATTTAGATGGTGAGACAAACCTGAAGGTGAAAAGATCGTTGGAGGTTACCATGCTTCTGTGTAATGATGAAACTTTTAAAGATTTCTCAGGAACAATACGCTGTGAAGACCCAAATCCTAGTCTTTATACGTTTGTTGGAAATTTTGAGTATGAACGTCAGGTTTATCCTCTTGATCCTGGTCAAATTCTCCTCCGAGATTCAAAGCTTAGGAACACTGATTTCATATATGGAGTGGTTATTTTCACTGGTCATGAAAGCAAAGTCATGCAGAATTCTACAAAATCTCCTTCAAAAAGGAGCAGAATAGAAAAAAAGATGGATTACATCATATACATTCTTTTCACTGTTCTCCTTTTGATATCCTTGGTCAGTTCAGTAATATTTGCTGTAATCACTAGATTTCAAACTGTAAATTGGTGGTATTTACGGCCCACGCAAACAGATGTCCTGTATGATCCTAATAATGCCGCATTGGCTGGGTTGAGTCATCTGGTTACTGCACTCATCCTTTATGGGTATTTGATACCCATATCACTTTATGTGTCAATCGAGGTTGTGAAGGTTTTACAAGCCACTTTGATCGATCAAGACTTACACATGTATCATGAAGAAACAGGGACTCCAGCTAATGCAAGAACGTCAAATTTGAATGAAGAGTTGGGCCAGGTGGATACTATACTTTCTGATAAGACTGGTACTTTAACCTGCAATCAGATGGATTTTTTAAAGTGCTCCATTGCTGGTGCTGCATATGGTGTGAGTCCCAGTGAAGTTGAACTTGCTGCAGCACAGCAGATGGCTTTTGAACTTGAGGAGGGCCAGGAGGAGGATCTCCCTAATTTACCAACACATAAGGGTAAAGCACATGTTTCGTGGGAAAACTTTGAACTGGAGAATGTTGTTACTTCCAAGGATGATGAGGTTCAGAAGGCTGCTATAAAGGGTTTCAGTTTTGAGGACAACCGTCTCATGAATTGTAACTGGTTGAAAGAGCCCAATCCTGATGTCCTTTTGTTGTTTTTCCGAATATTAGCTGTTTGCCATACTGCCATTCCTGAGTTGAATGAGGAGACTGGAAGTTTAACTTATGAGGCTGAATCACCTGATGAAGGGGCTTTTCTTGCAGCAGCTAGAGAATTCGGTTTTGAGTTTTGTAAAAGAACTCAAGCAAGTGTTTTCATCCGTGAAAAACTTTCACCTTCTAAACAAGCTGTTGAAAGGGAGTACAAGATCCTGAATCTGTTGGATTTCACTAGCAAAAGAAAGCGGATGACAGTGATAGTGCGTGATGAGGGGGGGAGCTTACTTCTTATGTGCAAAGGGGCTGACAGTATCATATTTGATCGATTGTCAAAGAATGGAAAGATGTTTTTGGAGACTACCACTAAACATTTGAATGAATATGGAGAAAATGGTTTGAGAACACTGGCCCTAGCTTATAGAAAGCTTGATGAGGAAGAGTACAATGCTTGGAACAATGAGTTTCAGAAAGCCAAAACGACTGTTGGGCCTGACAGAGAGGCAGTGCTTGAGCAGTTATCTGAAGCTATGGAAAAAGAGCTGATTCTTGTCGGGGCTACTGCTGTAGAAGACAAACTGCAAAAAGGGGTGCCCCAATGCATTGATAAACTTGCACAAGCTGGTCTCAAGATCTGGGTTTTGACGGGGGATAAGATGGAAACTGCAATCAACATTGGTTTTTCTTGTAGTTTACTTCGACAGGGCATGAAGCAGATCTGTATAACTACTCAGGATTCAGACTCAGTTACCAATTATGACAAAGAGGCCATCAAGGAGAGCATTTTGAATCAAATCATCAATGCATCACAAATGATAAAGCTGGAGACAGATCCACATGCTGCATTTGCATTAATTATTGATGGGAAGACTCTGGCATTTACTTTAGAAGATGATATGAAGCATCAATTTTTGGGACTGGCTGTTGATTGTGCTTCTGTTATCTGCTGTCGTGTGTCTCCCAAGCAAAAAGCGCTGGTAACAAGGTTAGTTAAAGAAGGGACTGGGAAGACCACTTTAGGAATAGGTGATGGTGCAAATGACGTTGGCATGATTCAAGAAGCAGATATCGGTGTTGGTATCAGTGGGGTTGAAGGTATGCAGGCAGTGATGGCTAGTGACTTTTCTGTTGCCCAATTTAGATTTTTGGAGCGGCTTTTGGTAGTCCATGGACACTGGTGTTACAAGAGAATAGCTCAAATGATATGTTATTTCTTCTACAAAAACATAGCATTTGGCCTCACCATCTTCTATTTTGAGGCAATGACAAGCTTCTCAGGGCAATCAGTTTATGATGACTGGTATATGATATTGTTCAATGTTGTTCTTACATCATTTCCTGTTATTTCTCTTGGAGTTTTTGAACAAGATGTTCCATCAGAAGTTTGCTTAGAGTTTCCTGCACTCTATCAACAAGGCCCCCAAAATTTGTTCTTTGACTGGTTTAGAATATTGGGATGGATGGGCAATGGTCTCTTTTGCTCACTCGTTATCTTCTTATTCAACATCTGTGTCTTCTCCGACCAAGCCTTCCGCAGTGATGGCCGTACCTCTGATATGGCAGCTGTTGGTACCACAATGTTCACTTGCATCATTTGGGTTGTCAACGGCCAGATTGCCCTCACAATTTGCCATTTCACGTGGATGCAATACCTCTTTATCATAGGCAGTGTAGCATTTTGGTATATCTTTCTGGTGCTATATGGCATGCTTTCTCCAACTATTTCAAAGACTGCGTACCAAATACTGCTTGAAGTTCTTGCTCCAGCACCTTTGTATTGGATGACGACCCTGATAGTAACAGTTACTTGCAATCTTCCTTATTATGCCCATATATGCATACAAAGATGTACCAATCCCTTAGATCATCACATCATCCAAGAGATCAAGCACTACAAGAAGGACATTGAGGACCAACGCATGTGGAAGAGGGAAAGGTCTAAAGCGAGACGGGATACCAAGATTGGATTCACTGCAAGAGTGGAAGCAAAGATGAGGAATTTGAAACAGAAGCTGCAGAAGAAGCAATCATCCTTGCCTTTCATGTCTCCAGAAGTACACTAA 3669 0.4118 MGLRKLRAKIKRSHLYTFACLRRSDTTQENPHNLQGPGFSRIVHCNHSNLHEKKSLFYCRNDISTTKYNVITFLPKALFEQFRRVANIYFLVAACLSASPISPFSPLSMIAPLAFVVGLSMAKEALEDWRRFRQDLKVNHRKAGVHKDNGVFHLKQWQDIMVGDVVKVDKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRSLEVTMLLCNDETFKDFSGTIRCEDPNPSLYTFVGNFEYERQVYPLDPGQILLRDSKLRNTDFIYGVVIFTGHESKVMQNSTKSPSKRSRIEKKMDYIIYILFTVLLLISLVSSVIFAVITRFQTVNWWYLRPTQTDVLYDPNNAALAGLSHLVTALILYGYLIPISLYVSIEVVKVLQATLIDQDLHMYHEETGTPANARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGAAYGVSPSEVELAAAQQMAFELEEGQEEDLPNLPTHKGKAHVSWENFELENVVTSKDDEVQKAAIKGFSFEDNRLMNCNWLKEPNPDVLLLFFRILAVCHTAIPELNEETGSLTYEAESPDEGAFLAAAREFGFEFCKRTQASVFIREKLSPSKQAVEREYKILNLLDFTSKRKRMTVIVRDEGGSLLLMCKGADSIIFDRLSKNGKMFLETTTKHLNEYGENGLRTLALAYRKLDEEEYNAWNNEFQKAKTTVGPDREAVLEQLSEAMEKELILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFSCSLLRQGMKQICITTQDSDSVTNYDKEAIKESILNQIINASQMIKLETDPHAAFALIIDGKTLAFTLEDDMKHQFLGLAVDCASVICCRVSPKQKALVTRLVKEGTGKTTLGIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSVAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTIFYFEAMTSFSGQSVYDDWYMILFNVVLTSFPVISLGVFEQDVPSEVCLEFPALYQQGPQNLFFDWFRILGWMGNGLFCSLVIFLFNICVFSDQAFRSDGRTSDMAAVGTTMFTCIIWVVNGQIALTICHFTWMQYLFIIGSVAFWYIFLVLYGMLSPTISKTAYQILLEVLAPAPLYWMTTLIVTVTCNLPYYAHICIQRCTNPLDHHIIQEIKHYKKDIEDQRMWKRERSKARRDTKIGFTARVEAKMRNLKQKLQKKQSSLPFMSPEVH 1222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1504 1222 Gene3D - 716 917 IPR023214 -
Dere11g1504 1222 FunFam Phospholipid-transporting ATPase 720 917 - -
Dere11g1504 1222 Pfam Phospholipid-translocating P-type ATPase C-terminal 905 1155 IPR032630 -
Dere11g1504 1222 SFLD Haloacid Dehalogenase 406 928 - -
Dere11g1504 1222 Gene3D - 566 699 IPR023299 GO:0000166
Dere11g1504 1222 FunFam Phospholipid-transporting ATPase 119 289 - -
Dere11g1504 1222 SFLD p-type atpase 406 928 IPR044492 -
Dere11g1504 1222 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 519 683 IPR023299 GO:0000166
Dere11g1504 1222 FunFam Phospholipid-transporting ATPase 587 718 - -
Dere11g1504 1222 NCBIfam HAD-IC family P-type ATPase 849 958 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Dere11g1504 1222 SUPERFAMILY Calcium ATPase, transmembrane domain M 53 1151 IPR023298 -
Dere11g1504 1222 Coils Coil 1193 1213 - -
Dere11g1504 1222 Pfam Phospholipid-translocating ATPase N-terminal 43 110 IPR032631 -
Dere11g1504 1222 PRINTS P-type cation-transporting ATPase superfamily signature 423 437 - -
Dere11g1504 1222 PRINTS P-type cation-transporting ATPase superfamily signature 877 896 - -
Dere11g1504 1222 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 32 1181 - -
Dere11g1504 1222 CDD P-type_ATPase_APLT_Dnf-like 60 1036 - -
Dere11g1504 1222 ProSitePatterns E1-E2 ATPases phosphorylation site. 425 431 IPR018303 -
Dere11g1504 1222 Pfam Cation transport ATPase (P-type) 542 647 - -
Dere11g1504 1222 Gene3D - 118 289 - -
Dere11g1504 1222 SUPERFAMILY Calcium ATPase, transduction domain A 147 287 IPR008250 -
Dere11g1504 1222 NCBIfam phospholipid-translocating P-type ATPase 58 1163 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Dere11g1504 1222 SUPERFAMILY HAD-like 411 921 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1504 Dere-ChrDere11 27650446 27655942 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1504 1 1214 Primary Pumps ATPases AT1G17500 71.440 0.0 1845
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere12g1389 12 25542617 25548617 Dere11g1504 11 27650446 27655942 CCT