LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere11g1497	ATGAACCAAGATGCTGCTTTTTACTTTATGTGGTTGCCACTATGCTCTATTGTTCTGCTCAAACACATAATTTATAGTATATACCATGTAGAAATACCTATTGCAGTTCAACTAGAAAAATCACACCGTTCATCGCTTACAGGAAATAGGTCCATTAATAAGCAGACAACCTTTGCAGAAAGATTTCAAATGGTTGATAGCAATACATCTTCTGGATCACCTGAAGAAACTCAAAACCCTGTCCCAGATGGGAATGCACCTTCTGAAAGTGATCTTGTGCTGGATACTCTAGCCCAAAAAGTTCAAGAATCTCTCTCTCTTGAAAAAAGACATAAATTTTGGGAAACCCAACCTGTTGGGCAGTTCAAGGATCTAGGAAACACCAGTTTGCGTGAAGGCCCTATTGAACCTCCAACTCCCTTATCTGACGTCAAACAAGAACCATATAATCTTCCAAACCTCTATGAATGGACTACTTGTGACATCAACTCTGAGGAGATGTGTAATGAGGTTTACAACCTTCTTGCTAATAATTATGTTGAAGATGATGAGAACATGTTCAGATTTAACTACTCAAAGGAATTTCTGCGCTGGGCTCTTCAACCTCCTGGTTATTTCAGAAGTTGGCATATTGGTGTCCGTGTTAGAAGTTCCAAAAAGTTGGTTGCCTTCATTACAGGTGTTCCTGCTAGAATCCGAGTTCGTGATGAGGTTGTTAATATGTCAGAGATTAATTTTCTGTGCGTCCATAAGAAGCTTAGATCAAAGAGGCTTGCTCCTGTCATGATCAAAGAGGTGACCAGGAGGGTGCACTTGGAGAATATTTGGCAAGCAGCTTATACTGCTGGAGTGATACTTCCTACACCAATAGCAACTTGCCAATACTGGCACAGATCTTTAAATCCCAAGAAGCTAATTGATGTTGGATTTTCTCGGCTTGGTGCTCGGATGACAATGAGTCGTACGATCAAGCTATATAAGTTACCGGAGTCAACAGTCACCACAGGATTCAGGAAGATGGAAATTCATGATGTTCCTGCAGTTACGAGGCTACTTAGGAATTACCTGAGCCAGTTTGTTGTTGCACCTGATTTTGATGAAAACGATGTGGAGCATTGGCTTCTTCCAAAGGAGAATGTTGTCAATAGTTACCTGGTTGAAAGTCCTGAAACTCATGAGATCACTGACTTCTGCAGTTTTTACACACTTCCTTCAACCATCCTTGGCAACCAAAACTATTCCATTTTGAAAGCAGCTTATTCCTACTATAATGTTTCAACAAAAACTCCATTGCTTCAGTTGATGAATGATGCTCTCATTGTGGCAAAACAGAATGACTATGACGTTTTCAATGCATTGGATGTTATGCAGAATGAGTCCTTTTTGAAGGAATTGAAATTTGGACCTGGTGATGGGAAGCTTCACTACTATCTTTACAACTATAGAATAAGGCAGGCACTGAAGCCATCAGAACTTGGGCTTGTGCTCTTATAG	1494	0.4029	MNQDAAFYFMWLPLCSIVLLKHIIYSIYHVEIPIAVQLEKSHRSSLTGNRSINKQTTFAERFQMVDSNTSSGSPEETQNPVPDGNAPSESDLVLDTLAQKVQESLSLEKRHKFWETQPVGQFKDLGNTSLREGPIEPPTPLSDVKQEPYNLPNLYEWTTCDINSEEMCNEVYNLLANNYVEDDENMFRFNYSKEFLRWALQPPGYFRSWHIGVRVRSSKKLVAFITGVPARIRVRDEVVNMSEINFLCVHKKLRSKRLAPVMIKEVTRRVHLENIWQAAYTAGVILPTPIATCQYWHRSLNPKKLIDVGFSRLGARMTMSRTIKLYKLPESTVTTGFRKMEIHDVPAVTRLLRNYLSQFVVAPDFDENDVEHWLLPKENVVNSYLVESPETHEITDFCSFYTLPSTILGNQNYSILKAAYSYYNVSTKTPLLQLMNDALIVAKQNDYDVFNALDVMQNESFLKELKFGPGDGKLHYYLYNYRIRQALKPSELGLVLL	497

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere11g1497	497	Pfam	Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain	307	485	IPR022677	GO:0004379
	Dere11g1497	497	MobiDBLite	consensus disorder prediction	66	90	-	-
	Dere11g1497	497	Gene3D	-	102	497	-	-
	Dere11g1497	497	SUPERFAMILY	Acyl-CoA N-acyltransferases (Nat)	295	497	IPR016181	-
	Dere11g1497	497	FunFam	Glycylpeptide N-tetradecanoyltransferase	107	279	-	-
	Dere11g1497	497	SUPERFAMILY	Acyl-CoA N-acyltransferases (Nat)	109	294	IPR016181	-
	Dere11g1497	497	FunFam	Glycylpeptide N-tetradecanoyltransferase	103	497	-	-
	Dere11g1497	497	Pfam	Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain	134	293	IPR022676	GO:0004379
	Dere11g1497	497	PANTHER	N-MYRISTOYL TRANSFERASE	97	497	IPR000903	GO:0004379\|GO:0006499
	Dere11g1497	497	ProSitePatterns	Myristoyl-CoA:protein N-myristoyltransferase signature 2.	466	472	IPR022678	GO:0004379
	Dere11g1497	497	MobiDBLite	consensus disorder prediction	66	85	-	-
	Dere11g1497	497	ProSitePatterns	Myristoyl-CoA:protein N-myristoyltransferase signature 1.	243	251	IPR022678	GO:0004379

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere11g1497	Dere-ChrDere11	27589585	27592255	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere11g1497	64	497	Acyl Lipid Metabolism Gene Families	AT5G57020	80.184	0.0	748