Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1491 ATGGCTGCAAGTGAAGGAAAGACGTTCAAGATCAAAGGCACTTTGATCATCGTCAAGCCTAACCTCAGTGCAGTTGATTCTAACTCCGAGGGTCTCTTACAGTTCCTCACTCTTGAATTGATCAGTGCTTCCAAGCCATTCCCACCTGAAAATGGGTTGTCGAAACATGAACATTCTGCCTCTTTGGAAGGGTCTATTACCCCAAAACTTGAAGATTCTGCTTCAGTTGAAGGGTCTAATACCTCATCACAGATCTTGCCTGTAACCCAGTCTAAGTACATTGTCTATTTTGATTGGAGCCATGAGATGGGAATCCCTGGAGCCTTTGTTATAAGAAACCTTCACTCCACTGCTCATTTCTACCTTGTGAGTCTCACCATTGAAGGCATTCCGAATCATCGTGCTCCCATCAATTTTGTTTGCAGATCATGGGTTTACCCAGACATCAAATATAAAAGTCCTCGTGTTTTCTTCATCAACAAGTCATATCTCCCAAGAGAGACACCAAAGGGATTGCGCAAATACAGGGAACAAGAGCTGAAAACTTTAAGAGGAGATGGAACTGGGGAGCGCCAGGAATGGGAAAGAATCTATGATTATGCTTTCTACAATGATTTGGGCAAACCTGATCAGAGTCCAGAACTAGCTCGTCCTGTTCTTGGAGGTTCCAGTGAATATCCCTACCCTCGTAGGGGAAGAACTGGCAGGCCATCAACTCAAACAGATCCTGACAGTGAGAGCAGACTTCCTGATGATCAAGGATTTTCAGTCTATGTTCCAAGAGATGACCGATTTGGTGACCAGAAGCTGTTTGAATTCGTGTCTTATTTTCCGAAATCATTGATTAACAGTTTGAAAGGTTATATGAAAGAGCAATTATTGGAGGACGATGCAGAAGAGTTTGTGAGCTTCGAAGATGTACGTCAAGTCCTTTTCAAAGATGGCTTTAAATTTTCTGTGCCTCAAGCTTTACTTGAAGCTATTGCCGCAAGGCTACCTATAGAGGTCCCATCTGATGGCGAGCTGACAGTATTATTTCCAACTCCTAGCGTCATTCAAGATAATCTGGATGGGTGGATGACTGATGAGGAGTTTGCTAGAGAGATGCTTGCAGGTGTGAATCCTGGTTTAATCCGCCTTCTCCAAGAGTTTCCCCTAAAAAGCCAGCTAGATACTAAGGTCTATGGCGATCAGACCAGTAAGATAACCAAAGAACATTTGGAGAAAGGTCTTTGTGGGCTCACAGTAGATAAGGCTCTCAATAGTAAGCGATTATTCATACTAGATCACCATGACTCGTTCATGCCATATCTGAGGCTGATTAATGAAACTTCGAGAAAGGCTTATGCCAGTAGGACAATTCTTTTCTTGAAATATGATGGGACTTTAAAGCCATTGGCTATTGAATTAAGCTTACCCCATCCTCTCGGGGATGAACATGGTGCTGTTAGTAAAGTCTACTTGCCTGCAAATGAAGGTGTTGAGGCTTCCATTTGGCAACTTGTTAAAGCTTATGTAATAGTAAATGACTCAGGCTACCATCAGCTTATTAGCCACTGGTTAAATACTCATGCTGCGATTGAGCCATTTGTCATAGCAGCAAACAGACAGCTTAGTGTGCTTCACCCTATTTATAAACTTTTACATCCTCATTTTCATGATACAATGTTCATAAATGCACTCGCTCGACAAAACTTAATCAGTGCAGACGGCATTATAGAGAGCTCATTCTTGCCTGGAAAATATTCTATGGTGATGTCGTCCGCAGTTTACAAGAATTGGAATTTTCTCGAGCAAGCATTGCCTGCGGATCTTATCAAGAGAGGAATGGCAGTTAATGATAAATCTTCCCCTCACGGGCTTCGCCTTGTGATAGAGGACTACCCTTTTGCTGTTGATGGACTAGACATATGGGATGCTATCAAGAAATGGGTTCATGAATATGTATTCTCCTACTATGAGACAGATGACTGTATTAAACAAGACATTGAGCTACAATCTTGGTGGAAAGAACTAGTGGAAGTGGGTCATGCTGACTTAAAAGATAAAGATTGGTGGCCTAAGATGCAAACATGTGAAAAGCTTATTGAATGTTGCACTATTATCATTTGGATTTCTTCAGCTCTCCATGCAGCTGTTAATTTTGGACAGTTTCCTTATGGAGGCTACATCCTAAATCGCCCAACTCTCAGCAGAAGGTTTATGCCTGAGGAAGGAACCCAAGAATATGAAGAGCTTGTGAAGAACCCACAACTAGCATTCTTAAAAACTATTACACCAAAGTTTGAGACCCTTCTTGACCTTTCTGTGATAGAAATACTGTCAGGCCATACCACTGACGAAGTCTACCTTGGGACAAGAGACAATCCATATTGGACCTCTGATGTGAAGGCTTTGGATGCTTTTAAGAAATTTGGAAAAAAAATGGCAGAGATAGAGAAAGTACTTACAGAGAGGAACGAAGATCCAACGCTATTAAATAGGGTTGGGCCAATTAAGATGCCATACACTTTGCTTTATCCTACGAGTGAACCAGGATTGACAGCAAGAGGAATTCCTAACAGTATATCTATATGA 2577 0.4175 MAASEGKTFKIKGTLIIVKPNLSAVDSNSEGLLQFLTLELISASKPFPPENGLSKHEHSASLEGSITPKLEDSASVEGSNTSSQILPVTQSKYIVYFDWSHEMGIPGAFVIRNLHSTAHFYLVSLTIEGIPNHRAPINFVCRSWVYPDIKYKSPRVFFINKSYLPRETPKGLRKYREQELKTLRGDGTGERQEWERIYDYAFYNDLGKPDQSPELARPVLGGSSEYPYPRRGRTGRPSTQTDPDSESRLPDDQGFSVYVPRDDRFGDQKLFEFVSYFPKSLINSLKGYMKEQLLEDDAEEFVSFEDVRQVLFKDGFKFSVPQALLEAIAARLPIEVPSDGELTVLFPTPSVIQDNLDGWMTDEEFAREMLAGVNPGLIRLLQEFPLKSQLDTKVYGDQTSKITKEHLEKGLCGLTVDKALNSKRLFILDHHDSFMPYLRLINETSRKAYASRTILFLKYDGTLKPLAIELSLPHPLGDEHGAVSKVYLPANEGVEASIWQLVKAYVIVNDSGYHQLISHWLNTHAAIEPFVIAANRQLSVLHPIYKLLHPHFHDTMFINALARQNLISADGIIESSFLPGKYSMVMSSAVYKNWNFLEQALPADLIKRGMAVNDKSSPHGLRLVIEDYPFAVDGLDIWDAIKKWVHEYVFSYYETDDCIKQDIELQSWWKELVEVGHADLKDKDWWPKMQTCEKLIECCTIIIWISSALHAAVNFGQFPYGGYILNRPTLSRRFMPEEGTQEYEELVKNPQLAFLKTITPKFETLLDLSVIEILSGHTTDEVYLGTRDNPYWTSDVKALDAFKKFGKKMAEIEKVLTERNEDPTLLNRVGPIKMPYTLLYPTSEPGLTARGIPNSISI 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1491 858 FunFam Lipoxygenase 358 491 - -
Dere11g1491 858 Gene3D PLAT/LH2 domain 8 181 - -
Dere11g1491 858 Pfam PLAT/LH2 domain 83 158 IPR001024 GO:0005515
Dere11g1491 858 PRINTS Plant lipoxygenase signature 383 402 IPR001246 GO:0016491
Dere11g1491 858 PRINTS Plant lipoxygenase signature 194 210 IPR001246 GO:0016491
Dere11g1491 858 PRINTS Plant lipoxygenase signature 771 785 IPR001246 GO:0016491
Dere11g1491 858 PRINTS Plant lipoxygenase signature 344 360 IPR001246 GO:0016491
Dere11g1491 858 PRINTS Plant lipoxygenase signature 155 176 IPR001246 GO:0016491
Dere11g1491 858 PRINTS Plant lipoxygenase signature 129 147 IPR001246 GO:0016491
Dere11g1491 858 PRINTS Plant lipoxygenase signature 227 246 IPR001246 GO:0016491
Dere11g1491 858 PRINTS Plant lipoxygenase signature 449 473 IPR001246 GO:0016491
Dere11g1491 858 Pfam Lipoxygenase 171 841 IPR013819 GO:0016702|GO:0046872
Dere11g1491 858 FunFam Lipoxygenase 493 857 - -
Dere11g1491 858 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 162 858 IPR013819 GO:0016702|GO:0046872
Dere11g1491 858 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 11 163 IPR036392 GO:0005515
Dere11g1491 858 Gene3D - 511 856 - -
Dere11g1491 858 SMART LH2_4 9 160 IPR001024 GO:0005515
Dere11g1491 858 FunFam Lipoxygenase 164 268 - -
Dere11g1491 858 ProSitePatterns Lipoxygenases iron-binding region signature 2. 541 551 IPR020834 GO:0016702|GO:0046872
Dere11g1491 858 ProSitePatterns Lipoxygenases iron-binding region signature 1. 514 528 IPR020833 GO:0016702|GO:0046872
Dere11g1491 858 PRINTS Lipoxygenase signature 514 531 IPR013819 GO:0016702|GO:0046872
Dere11g1491 858 PRINTS Lipoxygenase signature 496 513 IPR013819 GO:0016702|GO:0046872
Dere11g1491 858 PRINTS Lipoxygenase signature 534 554 IPR013819 GO:0016702|GO:0046872
Dere11g1491 858 ProSiteProfiles PLAT domain profile. 11 159 IPR001024 GO:0005515
Dere11g1491 858 Gene3D - 376 510 - -
Dere11g1491 858 PANTHER LIPOXYGENASE 11 858 IPR000907 GO:0016702|GO:0034440|GO:0046872
Dere11g1491 858 Gene3D - 289 375 IPR027433 -
Dere11g1491 858 MobiDBLite consensus disorder prediction 209 253 - -
Dere11g1491 858 Gene3D - 182 286 - -
Dere11g1491 858 SUPERFAMILY Lipoxigenase 164 858 IPR036226 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1491 Dere-ChrDere11 27542523 27548866 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1491 2 858 Acyl Lipid Metabolism Gene Families AT1G55020 55.109 0.0 946