Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1484 ATGGCGTATCAGTCCCCTGATCGCGAATCAGGATCCGACCCGCCAACCCCAACTCGCCTCTATAACCCCTACAAGGACCTCGAAGTCCCCATTCGAAACCTATACCAGCTTCCCACTTCCCCTGAGCATCTGTTCGTCGAAGAGGCTCGCCGCAAACGCCGATCCTGGGGTGAGAACCTCACCTTCTACACCGGCTGCGGCTACCTCGCCGGAGCCGTCGGTGGAGCTGCCGTTGGCCTGGTCGATGGCGTGAAATCTTTCGAATCTGGTGACACCACGAAGCTCCGGTTAAACCGGGTCCTGAACGCTTCCGGCCATGCGGGTCGGACTTGGGGTAACCGACTTGGTGTGATTGGGTTGCTCTATGCCGGTATAGAGAGCGGGATAGTGGCCGCGAGGGACACTGATGATGTGTGGAATAGTGTGGCGGCGGGGCTTGGTACTGGTGCGTTGTATCGAGCTGCGAGAGGGGTGAGATCAGCTGCGGTTGCGGGAGCAGTAGGCGGAGTTCTGGTAGGAGTCGCCGTGACGGCCAAGCAGGCGTTGAAACGTTACGTGCCAATATGA 567 0.5926 MAYQSPDRESGSDPPTPTRLYNPYKDLEVPIRNLYQLPTSPEHLFVEEARRKRRSWGENLTFYTGCGYLAGAVGGAAVGLVDGVKSFESGDTTKLRLNRVLNASGHAGRTWGNRLGVIGLLYAGIESGIVAARDTDDVWNSVAAGLGTGALYRAARGVRSAAVAGAVGGVLVGVAVTAKQALKRYVPI 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1484 188 MobiDBLite consensus disorder prediction 1 21 - -
Dere11g1484 188 PANTHER TIM23 34 177 IPR045238 GO:0022857
Dere11g1484 188 MobiDBLite consensus disorder prediction 1 17 - -
Dere11g1484 188 Pfam Tim17/Tim22/Tim23/Pmp24 family 62 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1484 Dere-ChrDere11 27368620 27369186 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1484 9 188 Chloroplast and Mitochondria Gene Families AT1G72750 71.038 1.99e-81 238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere12g1379 12 25470202 25470768 Dere11g1484 11 27368620 27369186 CCT