Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1473 ATGGGCACTTCTCATCGGAAAGAGGATAAATTGAGCCTTCTTTACGATGCATCATATAGAGGCTCTGCATCAGCTTTGACCTCACTTCTAAAGCAAGAACCTTTAATACTTCACAAAATTTCTAAAAGTGCCTTCGCTGAAATACCTTTACACATATCAGCTTTGCTTGGCCACCTTGAATTTGCAATGGCACTTCTCTCTTACAAACCCAAACTCGCCCTCGACTTGGACACATCCCGAAGCACGGCCCTCGACTTGGCTTCTGCAGAGGGTCACATCCACATAGTTAAGGAACTACTAAAAGTTAATAAGCAGCCATGCTTGTTTCCTGATGAAGAAGGCAGAATTCCTCTACACTATGCAGCTACGAGAGGACGAACAGAGGTTGTGAAAGAGTTGATCAACGCGAAGCCAGAATCTCTGAGTTTTCGTGACAACGTAAAGACTATTTTTCACTTGTGTGTGACGTACAACCATTTGGAAACCCTAAAAGCTTTAGTGGACTTGGAGCTTGCCATGACTGGCGAGCTTCACAACTTCACAAGCTCTGATGGCACTGGGAACTCCGTTCTCCATTTAGCTGTCATGTTGAAGCAAGTTGAGACTGTAAGGTACCTACTAGAAGTCACAAAAACAGGAGATGTAGCAAGCTTAAAGAATGAGATGGGTTTTACAGCCCATGACATCGTAGAACGTAGTCCAAAAGACTTAAAGATCCTTGAAATACAACCCATGTTCATGAATGTTGGCATCAAAACTGAAAAGAAAGGAATTGACACTCATCTGCACACCACTGGTAATATTCTGGACCATCCAGTAGCTGCGAGACCTCGAAAGCATAATTGTTTTGTAAGGGTTTTAAAATGGATTGGTAATTGGTTTAAGCACAAGGGCGACTGGTTGGAAGAGATGAGGGGGAATCTGAGTCTAGTGTCGACCGTTATATCAACCATAACCTTTCAATCTTTAGTGAACCCACCTGGTGGCTTCATCCAGCAAGGTTTATCTCAGAACACTGCGTCATTGTCCAACGATTCCCTCAATTGCACCATCCTTAATGATAATCAGACATATTCTCCGGGAGAAGCAGTCACATCTTTTCGTCTCCCAACTACATTTCTGGAATACGTAATTTGCAACACCATCTCATTCATTTCATCGCTTAGTGTCACCCTCTTGCTTGTAAGTGGAGTTCCTATGAGGAATAAAGTTGTGATATGGATGCTATCCATAGGCATGTGTATCACTCTCACATCCCTAGCACTCGCCTACATTGTTGACCTCGCAATGGTCATCCCAGAACATCTTTTGCGGACGAAACCAGCTTTGATCACGCTTGGAGCATCATATTTGGCCTGGGCTGGATTGCTTGTGCTAATTTTAATGTTAATCACATTGCGCTTTTTAATTTGGCTTGTGAAAAAATGCGTCAGGATAATCAGGAAGATGTCTAGAGTTAGATGA 1464 0.429 MGTSHRKEDKLSLLYDASYRGSASALTSLLKQEPLILHKISKSAFAEIPLHISALLGHLEFAMALLSYKPKLALDLDTSRSTALDLASAEGHIHIVKELLKVNKQPCLFPDEEGRIPLHYAATRGRTEVVKELINAKPESLSFRDNVKTIFHLCVTYNHLETLKALVDLELAMTGELHNFTSSDGTGNSVLHLAVMLKQVETVRYLLEVTKTGDVASLKNEMGFTAHDIVERSPKDLKILEIQPMFMNVGIKTEKKGIDTHLHTTGNILDHPVAARPRKHNCFVRVLKWIGNWFKHKGDWLEEMRGNLSLVSTVISTITFQSLVNPPGGFIQQGLSQNTASLSNDSLNCTILNDNQTYSPGEAVTSFRLPTTFLEYVICNTISFISSLSVTLLLVSGVPMRNKVVIWMLSIGMCITLTSLALAYIVDLAMVIPEHLLRTKPALITLGASYLAWAGLLVLILMLITLRFLIWLVKKCVRIIRKMSRVR 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1473 487 Pfam Ankyrin repeats (3 copies) 111 168 IPR002110 GO:0005515
Dere11g1473 487 Pfam Ankyrin repeats (3 copies) 16 101 IPR002110 GO:0005515
Dere11g1473 487 SMART ANK_2a 186 217 IPR002110 GO:0005515
Dere11g1473 487 SMART ANK_2a 45 74 IPR002110 GO:0005515
Dere11g1473 487 SMART ANK_2a 146 175 IPR002110 GO:0005515
Dere11g1473 487 SMART ANK_2a 113 143 IPR002110 GO:0005515
Dere11g1473 487 SMART ANK_2a 79 108 IPR002110 GO:0005515
Dere11g1473 487 ProSiteProfiles Ankyrin repeat profile. 113 135 IPR002110 GO:0005515
Dere11g1473 487 SUPERFAMILY Ankyrin repeat 7 232 IPR036770 -
Dere11g1473 487 ProSiteProfiles Ankyrin repeat region circular profile. 113 135 - -
Dere11g1473 487 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 9 464 - -
Dere11g1473 487 Gene3D - 2 240 IPR036770 -
Dere11g1473 487 Pfam Domain of unknown function 299 429 IPR026961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1473 Dere-ChrDere11 27111166 27113666 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1473 17 341 Miscellaneous Gene Families AT5G15500 28.274 2.21e-27 112