Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1469 ATGCTCCATCCATTAACGCAACAGACGGAGCTCACCAGAATGGAAACAGCTTGTCATCATGAAGATGACAAATTGAAAGCCCTTTACGAGGCTTCATACAAAGGGTGTGCTTCAACATTGAACACACTGAAACAACAAGACCCACTAATTTTGCACAGAATTAGCTCACGAACTATCTTCACTGAAACTCCCTTACACATATCAGCTTTACTTGGTCACCGGGACTTCACGAAAGCCCTTCTTTCTTGTCATCAGAAACCCGACCTTGCCCTTGAGGTGGATTCCTTCGGAAGCACAGCCCTCCACATGGCTTCTGCGGAGGGTCACATCGACATTGTGAAGGAGTTGGTGCAAGCTTGTGACCAGGCATGCTTGGTTCTTGATCGAGAAGGCAGAATTCCCCTGCACTATGCAGTTATAAGAGGGAGATTGGAGATTGTGAAAGAGCTAGTTAGAGTAAAGCCAGAGTCTTTGAAAGTCCTTGACAAAGGGAAAAGTGTATTCCATTTGTGTGTGACATACAACCACTTGGAGATCCTAAAAGCTTTGGTGGAATTGGATATTGACACTCGCGAGCTCCTCAATTTGAGAGATTCGGACGGCAAGAACACCATTCTCCATTTGGCTGTCATGTTCAAGCAAGTTGAGATGGTAAGTTACCTCCTTTCGATTTCTGAGATAAGAGAAGCATCAAACTTGGAGAATGAGATGGGCTTTACAGCCCATGATATTCTTCAGCGAATTCCACGAGACTTCAAGAGCCTTGAAATACAAATCATATTGATGAGTGCCGGCATCATAAGTGAAAAGAAAGAAATGCACACTCCACATCCACAAGCAACAACGAGAACTTCGCAGAATTGTTGGAGAAATATTACAAAGAGTATGGGAAAATGGTTTAAGCATAATGGAGATTGGTTAGAAGAGATGAGGGGGAATATGAGTCTTGTGGCTACTGTCATCTCAACCATAACATTTCAAGCTGTAATTAACCCTCCAGGCGGTGTCATTCAACAAGGTATATCTACATATTCCAAGTCCAACGACAGTTCTAGTTCTAGTATCATATACAATAGTACTTACCCTTCAGGACCCCTCAGCTGCTTATCAATAAGGGATGTTCGGGGTTATATGGACACAGATTATTTGTGTCCTGGGGAAGCGGTATTTGGTTCTAGTCACCCATATTTCTTTCGCTTCTTCTTAATTTACAATACCATCTCTTTCGTTGCATCACTTGGAGTCACCCTCTTGCTGGTAAGTGGAGTTCCTCTCAAGAATAAAGTTGTGATGTGGATGTTATGTATAGGCATGTGTATCACTCTCACATCCCTAGTACTCGCCTACTTTCAAGCCCTGTGGATGTTGAGCCCATATAAAGTTTGGGATACAGCCGACGAAGTGAATAACCTAGGCCGTATGGCTTGGATTGGATTGCTTGGACTCGTGGGTCTATACATCATAGTAGGCTTCTTTATATGGCTTGTGAAGAAATGCATAAAGATTATTAAGCATCTCATGTCAACGTATTGCTCTAGATATTCTTTGGTGATATTCAAGCTCAACACTACAGTGAAGGAAAGTATTCTATTAGATTTGAATTGGATTGTTTGGGCTCGTTGTTGTGTTCTTCCCAACACGCTTTATTACTGGGCTGTTCAAGATGTGCAGGAAGAAAACCAAACTCCTGCCAAATCAACTCACTTGAACGCTTTGATACAACCACTTGAGACTCCAAAAGCTTTGGTGGAAGGGGATGTTGATGATACCAAGGAGCTTTTGAACTATAGTGACATGGAAGGGAAGAACACCATTTTTCATTTGGCTATCAAGTTGAAGCAAGTTGAGGTACCCCTTTTCAATTCCCGAAATAAGAGAAGCAACAAATTTGAGGAAAGAAATGGATATTACAGCCCATGA 1920 0.4224 MLHPLTQQTELTRMETACHHEDDKLKALYEASYKGCASTLNTLKQQDPLILHRISSRTIFTETPLHISALLGHRDFTKALLSCHQKPDLALEVDSFGSTALHMASAEGHIDIVKELVQACDQACLVLDREGRIPLHYAVIRGRLEIVKELVRVKPESLKVLDKGKSVFHLCVTYNHLEILKALVELDIDTRELLNLRDSDGKNTILHLAVMFKQVEMVSYLLSISEIREASNLENEMGFTAHDILQRIPRDFKSLEIQIILMSAGIISEKKEMHTPHPQATTRTSQNCWRNITKSMGKWFKHNGDWLEEMRGNMSLVATVISTITFQAVINPPGGVIQQGISTYSKSNDSSSSSIIYNSTYPSGPLSCLSIRDVRGYMDTDYLCPGEAVFGSSHPYFFRFFLIYNTISFVASLGVTLLLVSGVPLKNKVVMWMLCIGMCITLTSLVLAYFQALWMLSPYKVWDTADEVNNLGRMAWIGLLGLVGLYIIVGFFIWLVKKCIKIIKHLMSTYCSRYSLVIFKLNTTVKESILLDLNWIVWARCCVLPNTLYYWAVQDVQEENQTPAKSTHLNALIQPLETPKALVEGDVDDTKELLNYSDMEGKNTIFHLAIKLKQVEVPLFNSRNKRSNKFEERNGYYSP 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1469 639 Pfam Domain of unknown function 377 455 IPR026961 -
Dere11g1469 639 Pfam Domain of unknown function 305 340 IPR026961 -
Dere11g1469 639 SMART ANK_2a 96 124 IPR002110 GO:0005515
Dere11g1469 639 SMART ANK_2a 130 160 IPR002110 GO:0005515
Dere11g1469 639 SMART ANK_2a 163 192 IPR002110 GO:0005515
Dere11g1469 639 SMART ANK_2a 201 229 IPR002110 GO:0005515
Dere11g1469 639 SMART ANK_2a 60 89 IPR002110 GO:0005515
Dere11g1469 639 ProSiteProfiles Ankyrin repeat profile. 96 118 IPR002110 GO:0005515
Dere11g1469 639 Pfam Ankyrin repeats (3 copies) 135 223 IPR002110 GO:0005515
Dere11g1469 639 Pfam Ankyrin repeats (3 copies) 30 118 IPR002110 GO:0005515
Dere11g1469 639 SUPERFAMILY Ankyrin repeat 22 247 IPR036770 -
Dere11g1469 639 ProSiteProfiles Ankyrin repeat region circular profile. 96 118 - -
Dere11g1469 639 Gene3D - 4 248 IPR036770 -
Dere11g1469 639 ProSiteProfiles Ankyrin repeat region circular profile. 130 152 - -
Dere11g1469 639 ProSiteProfiles Ankyrin repeat profile. 130 152 IPR002110 GO:0005515
Dere11g1469 639 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 23 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1469 Dere-ChrDere11 27017671 27021480 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1469 26 436 Miscellaneous Gene Families AT5G15500 27.419 2.14e-27 114