Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1468 ATGCTCCATCCATTAACGCAACAGACGGAGCTCACCAGAATGGAAACTGCTTGTCATCATGAAGATGACAAATTGAAAGCCCTTTACGAGGCTTCACACAAAGGATGTGCTTCAACCTTGAACACACTGATACGACAAGACTCACTAATTTTGCTCAGAATTAGCTCACGAACTACCTTCACTGAAACTCCCTTACACATATCAGCTTTACTTGGTCACCGTGACTTCACGAAAGCCCTTCTTTCTTGTCATCAGAAATCCGACCTTGCCCTTAAGGTGGACTCCTTCGGAAGCACAGCCCTCCACATGGCTTCCGCGGAGGGTCACATCGACATTGTGAAGGAGTTGGTGCAAGCTTGTGACCAGGCATGCTTGGTTCTTGATCGAGAAGGCAGAATTCCCCTGCACTATGCAGTTATAAGAGGGAGATTGGAGATTGTGAAAGAGCTAGTTAGAGTAAAGCCAGAGTCTTTGAAAGTCCTTGACAAAGGAAAAAGTGTATTCCATTTGTGTGTGACATACAACCACTTGGAGATCCTAAAAGCTTTGGTGGAATTGGATATTCACACTCGCGAGCTCCTCAATTCGACAGATTTGGACGGCAAGAACACCATTCTCCATTTGGCTGTCATGTTCAAGCAAGTTGAGATGGTAAGTTACCTCCTTTCGATTTCTGAGATAAGAGAAGCATCAAACTTGAAGAATGAGATGGGCTTTACAGCCCATGATATTCTTCAGCGAATTCCACGAGACTTCAAGAGCCTTGAAATACAAATCATATTGATGAGTGCTGGCATCATAAGTGAAAAGAAAGAAATGCACACTCCACATCCACAAGCACCAACGAGAACTTCGCAGAATTGTTGGAGAAATATTACAAAGAGCATGGGAAAATGGTTTAAGCATAATGGAGATTGGTTAGAAGAGATGAGGGGGAATATGAGTCTTGTGGCTACTGTCATCTCAACCATAACATTTCAAGCTGTAATTAACCCTCCAGGCGGTGTCATTCAACAAGGTATATCTACATAA 1032 0.4331 MLHPLTQQTELTRMETACHHEDDKLKALYEASHKGCASTLNTLIRQDSLILLRISSRTTFTETPLHISALLGHRDFTKALLSCHQKSDLALKVDSFGSTALHMASAEGHIDIVKELVQACDQACLVLDREGRIPLHYAVIRGRLEIVKELVRVKPESLKVLDKGKSVFHLCVTYNHLEILKALVELDIHTRELLNSTDLDGKNTILHLAVMFKQVEMVSYLLSISEIREASNLKNEMGFTAHDILQRIPRDFKSLEIQIILMSAGIISEKKEMHTPHPQAPTRTSQNCWRNITKSMGKWFKHNGDWLEEMRGNMSLVATVISTITFQAVINPPGGVIQQGIST 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1468 343 Pfam Ankyrin repeats (3 copies) 130 189 IPR002110 GO:0005515
Dere11g1468 343 Pfam Ankyrin repeats (3 copies) 31 118 IPR002110 GO:0005515
Dere11g1468 343 ProSiteProfiles Ankyrin repeat profile. 96 118 IPR002110 GO:0005515
Dere11g1468 343 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 18 340 - -
Dere11g1468 343 ProSiteProfiles Ankyrin repeat region circular profile. 96 118 - -
Dere11g1468 343 Gene3D - 4 251 IPR036770 -
Dere11g1468 343 SUPERFAMILY Ankyrin repeat 22 247 IPR036770 -
Dere11g1468 343 ProSiteProfiles Ankyrin repeat region circular profile. 130 152 - -
Dere11g1468 343 Pfam Domain of unknown function 305 339 IPR026961 -
Dere11g1468 343 ProSiteProfiles Ankyrin repeat profile. 130 152 IPR002110 GO:0005515
Dere11g1468 343 SMART ANK_2a 130 160 IPR002110 GO:0005515
Dere11g1468 343 SMART ANK_2a 96 124 IPR002110 GO:0005515
Dere11g1468 343 SMART ANK_2a 60 91 IPR002110 GO:0005515
Dere11g1468 343 SMART ANK_2a 163 193 IPR002110 GO:0005515
Dere11g1468 343 SMART ANK_2a 201 229 IPR002110 GO:0005515
Dere11g1468 343 SMART ANK_2a 23 52 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1468 Dere-ChrDere11 27009967 27011530 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1468 31 339 Miscellaneous Gene Families AT4G10720 27.273 7.24e-23 96.7