Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1466 ATGAGCTTGAGTGAGAGTGAGGCCGAGGAAGAATTGGCTCAAGAAGTTCAAGTTCCGGCCGATATTGATTGGCATATGCTTGATAAATCGAAATTTTTCTTCCTTGGTGCTGCCCTTTTTTCAGGGGTTTCGGCGACTCTGTACCCGATTGTTGTGTTGAAAACCCGGCAGCAAGTAGCTCAATCCCAAGTTTCCTGCATCAAAACTGCATTTTCACTTATTAGGCATGAGGGTTTTCGAGCATTGTACAGAGGATTTGGTACTTCCTTGATGGGTACAATCCCAGCTCGAGCACTATATATGGCTGCCCTGGAGGTTACAAAGAGTAATGTAGGTACTGCCACAGTTAGGTTAGGGCTTGCAGAACCCACTGCAGCTACTGTTGCCAATGCAGCTGCAGGCTTGAGTGCAGCCATGGCAGCTCAACTCGTGTGGACCCCCGTTGATGTTGTGAGCCAGAGGTTGATGGTTCAAGGTGGTTGTAATTCAAATACTCCTAAGGCTTCGGCACAACTATATGTCAATGGGATTGATGCTTTCAAGAAAATTCTGAGCACAGATGGTCCCAGAGGTTTGTATAGGGGCTTTGGGATATCAATTTTAACCTATGCACCGTCAAATGCAGTTTGGTGGGCTTCTTACTCTGTTGCACAAAGGCTGATTTGGGGAGGAATTGGGTATTACTGGTGCAAAAAAGATGATAAGAGCAGCGATTCTACTGCTAATGTATTGAGACCAGATTCGAAAACAGTAATGGCAGTTCAGGGAGTCAGTGCAGCAATGGCAGGTGGAATGTCTGCCTTAATTACTATGCCGCTGGACACAATCAAGACAAGACTTCAGGTCTTGGATGGTGATGAGAATGGCCGTCGAGGACCAACGGTTATGCAGACAGTGAGAAAATTAATTAAGGAAGGTGGTTGGGTGGCCTGTTACAGAGGGTTGGGACCTCGATGGGCTTCAATGTCAATGTCTGCAACAACAATGATCACTACCTATGAGTTTTTAAAACGGCTTTCCACAAAGAATCAAGACGTTCTGACATGA 1047 0.4585 MSLSESEAEEELAQEVQVPADIDWHMLDKSKFFFLGAALFSGVSATLYPIVVLKTRQQVAQSQVSCIKTAFSLIRHEGFRALYRGFGTSLMGTIPARALYMAALEVTKSNVGTATVRLGLAEPTAATVANAAAGLSAAMAAQLVWTPVDVVSQRLMVQGGCNSNTPKASAQLYVNGIDAFKKILSTDGPRGLYRGFGISILTYAPSNAVWWASYSVAQRLIWGGIGYYWCKKDDKSSDSTANVLRPDSKTVMAVQGVSAAMAGGMSALITMPLDTIKTRLQVLDGDENGRRGPTVMQTVRKLIKEGGWVACYRGLGPRWASMSMSATTMITTYEFLKRLSTKNQDVLT 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1466 348 ProSiteProfiles Solute carrier (Solcar) repeat profile. 250 339 IPR018108 -
Dere11g1466 348 ProSiteProfiles Solute carrier (Solcar) repeat profile. 28 110 IPR018108 -
Dere11g1466 348 PRINTS Mitochondrial carrier protein signature 85 105 IPR002067 GO:0055085
Dere11g1466 348 PRINTS Mitochondrial carrier protein signature 259 281 IPR002067 GO:0055085
Dere11g1466 348 PRINTS Mitochondrial carrier protein signature 193 211 IPR002067 GO:0055085
Dere11g1466 348 PRINTS Mitochondrial carrier protein signature 33 46 IPR002067 GO:0055085
Dere11g1466 348 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 14 344 - -
Dere11g1466 348 SUPERFAMILY Mitochondrial carrier 26 336 IPR023395 -
Dere11g1466 348 ProSiteProfiles Solute carrier (Solcar) repeat profile. 125 220 IPR018108 -
Dere11g1466 348 Pfam Mitochondrial carrier protein 253 343 IPR018108 -
Dere11g1466 348 Pfam Mitochondrial carrier protein 39 110 IPR018108 -
Dere11g1466 348 Pfam Mitochondrial carrier protein 127 221 IPR018108 -
Dere11g1466 348 Gene3D Mitochondrial carrier domain 31 346 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1466 Dere-ChrDere11 27002153 27003199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1466 8 345 Chloroplast and Mitochondria Gene Families AT1G72820 76.246 0.0 523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere11g1466 11 27002153 27003199 Dere11g1466 11 27002153 27003199 ECH