Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1458 ATGCTTAGTCTTTTCCTCCTGGACATCTCTCTCTGTCTCTCTGTTTTACTGGGTTCAACTTCATTGGCATATTGCTGGTTCAGAGTTGTAATGGAGCTTCTCGATTCGATCAAAGGGAGAAATCAAGAACTTGTTTTAAAAAGGGGATCAGAAATGTTGACTTGCATTGCGTGTTCGAAGCAGCTTAATAACAAAGGATCTCTTCCCCAACTAGAAGAGCACGAAGAACCTGTGGATACACCCAGGACCAAACAAGCCATTAAGGCCCTCACTGCTCAGATCAAGGACATGGCAGTGAAGGCATCTGGGGCATACAGAAATTGCAAGCCTTGTTCAGGATCTTCAAATGGTAATAGGAACCCGAGCTTTGCTGATTCTGATATGGCTTCAGAATCAGCGAGATTTCACTGTGCGTACAGAAGGACTGGGAGCTCCAACTCAACCCCAAGGCTTTGGGGAAAAGAGATGGAGGCGAGACTGAAAGGGCTCTCCAGTGGGGAAGGAACACCTGCGTCGGTGAGCGGGCGGACTGAGTCTGTGGTGTTCATGGAGGAGGATGAGCCCAAGGAATGGGTTGCTCAGGTGGAGCCTGGTGTGCTAATCACGTTTGTTTCGATGCCACAGGGTGGGAATGATCTGAAGCGGATACGGTTCAGCCGGGAAATGTTTAATAAATGGCAAGCTCAAAGGTGGTGGGCAGAGAATTATGACAAGGTCATGGAGTTGTACAATGTTCAAAGGTTCAATCAACAAGCGGTTCCTCTTCCAACCCCACCTAGATCTGAAGATGAGAGCTCAAAGATTGAATCTGTTAGGGATAGCCCTGTTACTCCTCCTCTTAGCAAAGAGCGTCCACCCCATCATTTTCTTCACCATCAAATGGGAATGGGATACTCCTCATCGGATTCACTGGATCAACACACAATGCAACCACGCCCTTGCTATGAAACAAGTGGTTTAGCTTCAACCCCTAAACTTTCTGGCATTAGTGGTGCAAAGACTGAAACATCTTCCTTAGACGGTTCTGTGAGGACCAGTTCATCAAGAGAGGGAGATCAGTCAGGTGAACTTTCAATCAGCAATGCCAGTGATATGGAGACTGAATGGGTCGAGCAGGATGAACCAGGAGTATACATCACCATCAGAGCACTGCCAGGTGGAGCCAGAGAACTCAGGCGTGTCCGGTTCAGCCGAGAAAGGTTTGGAGAAATGCATGCCAGACTGTGGTGGGAGGAGAACCGTGCAAGGATACAAGAACAATATTTGTGA 1269 0.4783 MLSLFLLDISLCLSVLLGSTSLAYCWFRVVMELLDSIKGRNQELVLKRGSEMLTCIACSKQLNNKGSLPQLEEHEEPVDTPRTKQAIKALTAQIKDMAVKASGAYRNCKPCSGSSNGNRNPSFADSDMASESARFHCAYRRTGSSNSTPRLWGKEMEARLKGLSSGEGTPASVSGRTESVVFMEEDEPKEWVAQVEPGVLITFVSMPQGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQRFNQQAVPLPTPPRSEDESSKIESVRDSPVTPPLSKERPPHHFLHHQMGMGYSSSDSLDQHTMQPRPCYETSGLASTPKLSGISGAKTETSSLDGSVRTSSSREGDQSGELSISNASDMETEWVEQDEPGVYITIRALPGGARELRRVRFSRERFGEMHARLWWEENRARIQEQYL 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1458 422 MobiDBLite consensus disorder prediction 296 366 - -
Dere11g1458 422 ProSiteProfiles BRX domain profile. 367 422 IPR013591 -
Dere11g1458 422 ProSiteProfiles BRX domain profile. 189 244 IPR013591 -
Dere11g1458 422 Pfam Transcription factor regulating root and shoot growth via Pin3 189 243 IPR013591 -
Dere11g1458 422 Pfam Transcription factor regulating root and shoot growth via Pin3 366 421 IPR013591 -
Dere11g1458 422 Pfam Transcription factor BRX N-terminal domain 79 111 IPR027988 -
Dere11g1458 422 PANTHER PROTEIN BREVIS RADIX-LIKE 1 52 422 IPR044532 -
Dere11g1458 422 MobiDBLite consensus disorder prediction 252 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1458 Dere-ChrDere11 26774119 26778192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1458 47 422 Major Intrinsic Protein MIP AT1G31880 47.475 5.23e-104 311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere11g1458 11 26774119 26778192 Dere11g1458 11 26774119 26778192 ECH