Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1440 ATGGGGTTTACTCTGACTCCACACTTGAGGATTGATGAAGTATATGGGAGTGGGAGAGAAAACCAAGAAGACCACCGAAGAGGCTTTTCTTCCCATCCTCGCTTGTCTGTTATGCCTTTAAGATCAGATGGTTCCCTCTGTGTTGCTGACCCTTTCAGGCACTCTGGCGCAGCTGAAGAATGGCGATATGATAATGGAGTAGCGGGAGGAAACTCAAATGAAGAAGGTCCAAAGCTAGAAGATTTCTTGGGTTGTTACTCGAACTCCTCTAATATTGCTGAAACGAAAGTGTATTGCCAAGGCAGTACTCATCATCAGCAAGACCAAAACCAAAGCCAGAACCAAAGCAGCATTTCCAGCAGAATCAATGTGAATGTGGCCCCAAGCTACAGCACCAACACTGAGATAGAAACTACTGGGGAAAATCTCACGAACCCATCTTCCTTGATCCAATCTTTTCATATATACAACGATAATGACCCACGAGCTATAATCCCAAGCAATGGCATGTACAAGTCTTGGTTGGCTCAATCTCAACCTTCTGCTGAATCAAATGGGTATAACTACCAATCTCTGTCCCTAACTATGAGTCCTAGTGTACAAGACGGTGTGTGTGGTGCAATTTCTCCTGCTCAAGTGGATGACGATACTCGTAAAAGGTCAATGGCAAAATCTCTTGCTGCTAGAGAACCTGTGCCTCGGAAATCTATTGATACTTTTGGTCAAAGAACATCTCAGTACAGAGGTGTTACAAGGCATAGATGGACTGGGAGATATGAGGCCCATTTGTGGGATAATAGTTGCAGGAAGGAAGGGCAAACAAGGAAAGGAAGGCAAGGTGGCTATGATAAGGAAGAAAAAGCAGCAAGGGCTTATGACTTAGCTGCACTCAAGTATTGGGGTCCAACCACTCACATAAATTTCCCTTTGAGCACTTACGAGAAGGAACTTGAAGAGATGAAGCACATGACTAGGCAAGAATTTGTCGCCAATTTGAGAAGGAAGAGCAGTGGATTTTCGAGAGGTGCATCTGTGTATAGGGGTGTGACAAGACATCATCAACATGGAAGGTGGCAAGCAAGGATTGGTAGAGTTGCCGGAAATAAAGACTTGTATCTTGGTACATTTAGCACACAAGAGGAAGCTGCAGAAGCATATGATATAGCAGCAATAAAGTTCAGGGGAACAAGTGCTGTGACCAACTTCGATATAAGCAGGTATGACGTGAAGAGAATATGCTCGAGCTCCACTCTCATTGCAGGAGATCTTGCAAAGAGGTCTCCAAAAGACTTACCTCCTGGAGTCGCCCCCACAACTGAGGACTTCAACTCTAGTGCGTCAACATCATTGGCGACACCTCATCATCATCAACAATCACAACCACAACACTCTTCTGATGAGTTAGCCAACATGGTGTGGAATGATAATGGAAACACCAACGACAAGCAGGTCAATGATCACGCTTCTGAGAACAGCAAGAATATCAAGAACGCCTCGAATTCAGAAGAGAGCCCCAAGTGTTCTGTGGGAATGGGTAATGAGTTTGGGGTGAATGGTGCAGAGTTCGGACACGGGTTCTTCTCACTGCAGGCACCAAAATACAATGATGATGATGATGGGAACAACGTGAATGATAATGATAACGTAAATAACGACAATCGCATTGGGAATCTGGCTTTGGTTCATCAAGTTCCTATGTTTGCTTTGTGGAATGAATGA 1719 0.445 MGFTLTPHLRIDEVYGSGRENQEDHRRGFSSHPRLSVMPLRSDGSLCVADPFRHSGAAEEWRYDNGVAGGNSNEEGPKLEDFLGCYSNSSNIAETKVYCQGSTHHQQDQNQSQNQSSISSRINVNVAPSYSTNTEIETTGENLTNPSSLIQSFHIYNDNDPRAIIPSNGMYKSWLAQSQPSAESNGYNYQSLSLTMSPSVQDGVCGAISPAQVDDDTRKRSMAKSLAAREPVPRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQGGYDKEEKAARAYDLAALKYWGPTTHINFPLSTYEKELEEMKHMTRQEFVANLRRKSSGFSRGASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGTSAVTNFDISRYDVKRICSSSTLIAGDLAKRSPKDLPPGVAPTTEDFNSSASTSLATPHHHQQSQPQHSSDELANMVWNDNGNTNDKQVNDHASENSKNIKNASNSEESPKCSVGMGNEFGVNGAEFGHGFFSLQAPKYNDDDDGNNVNDNDNVNNDNRIGNLALVHQVPMFALWNE 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1440 572 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 73 487 - -
Dere11g1440 572 FunFam AP2-like ethylene-responsive transcription factor 344 405 - -
Dere11g1440 572 ProSiteProfiles AP2/ERF domain profile. 246 309 IPR001471 GO:0003700|GO:0006355
Dere11g1440 572 MobiDBLite consensus disorder prediction 438 507 - -
Dere11g1440 572 FunFam AP2-like ethylene-responsive transcription factor ANT 245 311 - -
Dere11g1440 572 CDD AP2 344 405 IPR001471 GO:0003700|GO:0006355
Dere11g1440 572 MobiDBLite consensus disorder prediction 424 507 - -
Dere11g1440 572 CDD AP2 245 311 IPR001471 GO:0003700|GO:0006355
Dere11g1440 572 SUPERFAMILY DNA-binding domain 344 405 IPR016177 GO:0003677
Dere11g1440 572 PRINTS Ethylene responsive element binding protein signature 247 258 IPR001471 GO:0003700|GO:0006355
Dere11g1440 572 PRINTS Ethylene responsive element binding protein signature 385 405 IPR001471 GO:0003700|GO:0006355
Dere11g1440 572 MobiDBLite consensus disorder prediction 15 31 - -
Dere11g1440 572 MobiDBLite consensus disorder prediction 15 36 - -
Dere11g1440 572 MobiDBLite consensus disorder prediction 100 122 - -
Dere11g1440 572 Gene3D AP2/ERF domain 345 405 IPR036955 GO:0003700|GO:0006355
Dere11g1440 572 Gene3D AP2/ERF domain 245 311 IPR036955 GO:0003700|GO:0006355
Dere11g1440 572 Pfam AP2 domain 344 395 IPR001471 GO:0003700|GO:0006355
Dere11g1440 572 Pfam AP2 domain 246 301 IPR001471 GO:0003700|GO:0006355
Dere11g1440 572 ProSiteProfiles AP2/ERF domain profile. 345 403 IPR001471 GO:0003700|GO:0006355
Dere11g1440 572 SMART rav1_2 345 409 IPR001471 GO:0003700|GO:0006355
Dere11g1440 572 SMART rav1_2 246 315 IPR001471 GO:0003700|GO:0006355
Dere11g1440 572 SUPERFAMILY DNA-binding domain 245 311 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1440 Dere-ChrDere11 26507899 26511073 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1440 1 428 AP2-EREBP Transcription Factor Family AT1G72570 50.858 1.59e-134 396
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Dere11g1440 AP2 1.2e-09 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere11g1440 11 26507899 26511073 Dere11g1440 11 26507899 26511073 ECH