Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1437 ATGATAAGTGCAACAAGTGCAAGAAATAGGTCTCCTTTCACAGCAACTCAGTGGCAAGAACTTGAACAGCAAGCTCTTATCTTTAAATACATGATCTCAGGGACCCCCATCCCACCTGATCTCATTTACTCTGTCAAAAGAAGTCTAGACTCTTCAATGTCTTCTTCAGGGCTCTTCCCTCTCCAACCCATTGGATGGGGATGCCTTGAAATGGGATATGGCAGAAAAGTAGACCCAGAGCCAGGAAGGTGCAGAAGAACAGATGGCAAGAAATGGAGATGCTCGAAGGAAGCATATCCAGACTCAAAGTACTGCGAGAGACACATGCACAGAGGGCGAAACCGTTCAAGAAAGCCTGTGGAAGTATGTTCAACGACAACAAGAAGCATTTCAACGAACACATCACAATCAATCTCATCATCGTATAGTAACAGAAGCCTTACCATGGGCAACCCCAATACACCCTCAACAACCTCTTCTTTCCCTTTCTCTCTATTGCCCTCATCTATGCCCTCTAATTCCCAACCATATTCCCATCCTTACCAAAATTCTTCCCTTAACCCCTTGTTTTTCACCCATTCAACCTCTTCTACTAGACATCTCGATTCTGATTTTCCTCCACAAAGCAGCAATACCCACCAGCTCTTTTTGGACTCAGGATCTTATTCTATGGATCAGAAGGACTACAGGCATATTCATGGAATGAGGGAGGGAGTGGATGAGAGAGCTTTCTTCCCAGAAGCCTCTGGGAATGTTAGGAGCTTTCCTGATTCATATCAACAATTATCAATGAGCTCCTATAAACCCTATTCAAACTCCCAGTTCCAAAACATAAATGATAATTCAAGACAACAAGAGCAACATTGCTTTGTTCTGGGAAGGGACTTCAAATCACCGGGGCCAATAAAAAATGAGAACGAAACGGAGATAACCCAGAGACCCCTTCATCATTTCTTTGGTGAATGGCCTCCAAAGAACCCAGATTCCTGCCTTGATCTTGCTTCAAATTCCAGAATCCCCACTGTCTCTGCTTTTTCAATAGCTCCTGCTTCTTCTGAATATTTCTATGGACCAAACAGAGAACATATTCTGCTTTCTGTCATTGCCCTGCCCTTGGTTCCTTTGGCAACTGAGTTTGTAGCAGTGATCTAA 1152 0.4366 MISATSARNRSPFTATQWQELEQQALIFKYMISGTPIPPDLIYSVKRSLDSSMSSSGLFPLQPIGWGCLEMGYGRKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEVCSTTTRSISTNTSQSISSSYSNRSLTMGNPNTPSTTSSFPFSLLPSSMPSNSQPYSHPYQNSSLNPLFFTHSTSSTRHLDSDFPPQSSNTHQLFLDSGSYSMDQKDYRHIHGMREGVDERAFFPEASGNVRSFPDSYQQLSMSSYKPYSNSQFQNINDNSRQQEQHCFVLGRDFKSPGPIKNENETEITQRPLHHFFGEWPPKNPDSCLDLASNSRIPTVSAFSIAPASSEYFYGPNREHILLSVIALPLVPLATEFVAVI 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1437 383 MobiDBLite consensus disorder prediction 119 162 - -
Dere11g1437 383 MobiDBLite consensus disorder prediction 116 162 - -
Dere11g1437 383 Pfam WRC 79 121 IPR014977 -
Dere11g1437 383 ProSiteProfiles QLQ domain profile. 12 47 IPR014978 GO:0005524|GO:0005634|GO:0006355
Dere11g1437 383 PANTHER GROWTH-REGULATING FACTOR 5 11 337 IPR031137 GO:0005634|GO:0006351|GO:0032502
Dere11g1437 383 ProSiteProfiles WRC domain profile. 78 122 IPR014977 -
Dere11g1437 383 Pfam QLQ 12 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Dere11g1437 383 SMART QLQ_2 11 47 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1437 Dere-ChrDere11 26492718 26494607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1437 2 321 GRF Transcription Factor Family AT3G13960 40.409 1.65e-64 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Dere11g1437 WRC 2.1e-21 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere11g1437 11 26492718 26494607 Dere11g1437 11 26492718 26494607 ECH