Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1423 ATGGCATTGCAATTGCCAGCATGGCTTGCCACCTTCGCCTTACTCCTTTTCCTCCTGTTTCTTCGCCACAGCCGCCGCCGCCTACGTAACCTACCGCCGGGGCCAAAACCGTGGCCTATCATCGGAAACCTCAACCTCCTAGGTCCATTTCCTCACCGCTCCCTCCATGCTCTCTCCCAAAAATATGGGCCCATCTTGTATCTCAGGTTGGGCTCCAACGGTGTCGTTGTGGGCTCCTCAGCCGATGTGGCTAAAGCCTTCCTGAAAACCCACGGACTCACCTTTGCCTCACGGCCTAAGACCGCCGCAGGCAAATACACAACATACAACTACTCCAATATCATATGGGCTCCTTACGGCCCACACTGGCGCCAAGCCCGCAAGATATGCTTCACAGAACTATTCTCTCTCGACAGCCTGGAATCCTATGAGTATATCAGAAAGGAAGAGATGAAAACAATGCTTAATGAGCTATTCAAATCTTCAAACACAACCATATTACTGATAGATTTCCTTTACAGTTTGACCTTGAATATTATAAGTCGCATGGTGTTGGGGAAGAAGTACGTAGAGAAGACTCAAAGTGCCTTTGTCAGCTCGGAAGAGTTCAAGAAAATGCAGGATGAGTTTTTCTTTCTGAATACTGGGTTTTTGAATCTTGGGGATTTGATACCTTGGATTAACTTCTTGGACTTGCAGGGTTACGTAAAGAGAATGAAGGATTACAGTAAGAAAATTGATAGGTTTTTGGAGCATGTGGTGGATGAACACAATGAAAGAAGAAAAGGGATTAAGGATTATGTTGCCAAAGATATGTTAGATAGGCTTTTGCAGCTGGTAGATGACCCCACTCTTGAGGTCAAGCTTGACAGAGAGAGTGTCAAAGCAATTACCCAGGACCTTCTAACAGGTGGAACCGAAAGCTCTGCTGTAACAATGGAATGGGCAATGAGTGAGCTCTTGAAAAATCCCAAGACCCTAAAGAAGGCTACAGAAGAGCTAGACAGAGTAATTGGAAGAGAAAGATGGGTGGAAGAAAAAGACATCGTCAACTTGCCTTACATGGAAGCAATTGTCAAAGAGACAATGAGGCTGCACCCTGTGGGATCACTGTCGCCTCCAAGGCTTGCCCTAGATGACTCCAAGGTTTTAGGGTATGACATCCCAAAAGGGACCCAAGTGTTTATCAATGTGTGGGCAATTGGCAGAGACCCAACAATTTGGGACAACCCTGATGTTTTCTGGCCCGAGAGGTTCATGGGTAAGGATATCGATGTGAAAGGCCAAAACTTTGAGCTATTGCCATTTGGGGCTGGAAGAAGGGTGTGCCCTGGTTATACACTCGCACTCAAGGTGGTTCAGACAAGTTTGGCAAATTTGGTGCATGGGTTTGCATGGAGCTTGCCAGATAATATGAAGGAGATGGAGTTGAATATGGATGAAACTTTTAGGTTTTCTACCATTAAAAAGGAACCACTTGAGGCTCTGATTGAGCCTCAGCTTCCATCTCATCTTTATTTGCAGTAA 1527 0.4584 MALQLPAWLATFALLLFLLFLRHSRRRLRNLPPGPKPWPIIGNLNLLGPFPHRSLHALSQKYGPILYLRLGSNGVVVGSSADVAKAFLKTHGLTFASRPKTAAGKYTTYNYSNIIWAPYGPHWRQARKICFTELFSLDSLESYEYIRKEEMKTMLNELFKSSNTTILLIDFLYSLTLNIISRMVLGKKYVEKTQSAFVSSEEFKKMQDEFFFLNTGFLNLGDLIPWINFLDLQGYVKRMKDYSKKIDRFLEHVVDEHNERRKGIKDYVAKDMLDRLLQLVDDPTLEVKLDRESVKAITQDLLTGGTESSAVTMEWAMSELLKNPKTLKKATEELDRVIGRERWVEEKDIVNLPYMEAIVKETMRLHPVGSLSPPRLALDDSKVLGYDIPKGTQVFINVWAIGRDPTIWDNPDVFWPERFMGKDIDVKGQNFELLPFGAGRRVCPGYTLALKVVQTSLANLVHGFAWSLPDNMKEMELNMDETFRFSTIKKEPLEALIEPQLPSHLYLQ 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1423 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Dere11g1423 508 Gene3D Cytochrome P450 24 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g1423 508 SUPERFAMILY Cytochrome P450 32 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g1423 508 CDD CYP71_clan 63 493 - -
Dere11g1423 508 FunFam Cytochrome P450 84A1 23 501 - -
Dere11g1423 508 Pfam Cytochrome P450 32 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g1423 508 PRINTS P450 superfamily signature 443 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g1423 508 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g1423 508 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g1423 508 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g1423 508 PANTHER CYTOCHROME P450 98A9 5 507 - -
Dere11g1423 508 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g1423 508 PRINTS E-class P450 group I signature 175 193 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g1423 508 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g1423 508 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g1423 508 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g1423 508 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g1423 508 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g1423 508 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g1423 508 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1423 Dere-ChrDere11 26248887 26252383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1423 9 506 Cytochrome P450 AT5G07990 41.107 1.55e-134 397