Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1418 ATGTCTGCAACTATAATCAGCGATCCCATGGTTATATCAAACCCAGAAACCCAACCCGTGGCTACTACTACGATACTAGTTTCTGCACAAACCGAATTTGAATTTGCAATCTGTGATTGCTGTGGGCTGACAGAGGAATGCACCCCAGCTTACATAGAACGAATCAGAGAGCGATACTATGGAAAGTGGGTCTGTGGATTATGTGCAGAAGCTGTAAAAGATGAGATCTTAAGGTCTGAAAGGCTTGTCAGCACTGAAGAAGCCATGGCAAAGCACATGAACTTCTGCAAAAAGTTCAAGACTTCAGGGCCTCCTCCGAATCCAACAGTGCATTTGATTTCAGCCATGAGACAGATTCTTAGGAGGAGTTTGGATTCCCCGAGGGCTTTAAGGTTAAGATCCACACCAAGTAGTCCAACTAAGATGTCTGACACAGAAATTCATAGTACTCCTGGGCTGACCAGGTCTGAAAGTTGCTTCCCTAGTCTGTCTGGTTCATGA 501 0.4491 MSATIISDPMVISNPETQPVATTTILVSAQTEFEFAICDCCGLTEECTPAYIERIRERYYGKWVCGLCAEAVKDEILRSERLVSTEEAMAKHMNFCKKFKTSGPPPNPTVHLISAMRQILRRSLDSPRALRLRSTPSSPTKMSDTEIHSTPGLTRSESCFPSLSGS 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1418 166 PANTHER OS01G0745000 PROTEIN 26 164 IPR012876 -
Dere11g1418 166 Pfam Protein of unknown function (DUF1677) 34 122 IPR012876 -
Dere11g1418 166 MobiDBLite consensus disorder prediction 130 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1418 Dere-ChrDere11 26147704 26148204 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0456 04 4596735 4597813 Dere11g1418 11 26147704 26148204 ECH
Dere11g1418 11 26147704 26148204 Dere11g1418 11 26147704 26148204 ECH
Dere11g1418 11 26147704 26148204 Dere04g0457 04 4611041 4611505 ECH