Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1411 ATGGAAGAAAGATGCAGGGGAAGAATGGTGAGATACAGAGAGACAGAGGATTGGGAAGAGAGAAAAGGTAAGTTTCTCAGCTGGATGCAAATTAAACTTGGAGGAGGAAAGCTAGAGAACAGAAATCCAAACACCTATTCATCGTCAACTTCTTATCGCACAAAACAAGAGCCCCGAGAAGAATTCAGCGATTGGCCTCATGGTTTGCTAGCAATAGGAACTTTCGGAAACAAGGATGAAATCAAAGCAAAACCAGAGACCCAAAACACTCGTGAGGAAGACGATCCATCCTCATCATCCGAGGATATAGCAGATTTCACTGCTGAAGATATTGGGAAACTCCAGAAAGAGCTGACGAAGCTCTGGAGACGAAAACCCAATGTGGAAAAGGAGATCTCCGAACTCCCTCTGGACAGATTTCTCAACTGCCCATCCAGCTTGGAGGTCGATCGGAGGATCAGTAACGCTCTGTGTAGTGATTCTGATGACAAAGAAGAAGATATCGAGAAGACACTTAGTGTCATACTTGGTAAGTGCAAGGACATTTGCGGAGATAAAACCAAGAAGGCAATTGGGAAGAAATCGATTTCTTTCCTTCTGAAGAAGATGTTCGTTTGTAGAAGTGGGTTTGCGCTGCCACCAAATCCTAGAGATACCCTCCAGGAATCAAGAATGGAAAAGCTCTTAAGGACAATTCTTCACAAGAAAATATACTCCCAAAGTTCTTCTCGGGCATCGTCAATGAAGAGATGCCTAGAGGACAAGATTCCTAAGAAGAGGAATGAGGAAGAGGCAGAGGAGACAACTGATGATGGCTGTAAATGGGTTAAGACTGATTCTGAATGGCCGGTGGATTTCTACGTTTCCACTTCACTCGCTAGTTATCTTGACAAGAAACTTCTTGTATTGCTGAGAGATGGTAGAAAGCTATTGGGAACACTTCGCTCTTTCGATCAATTTGCTAATGCTGTTCTTGAGGGTGCCTGTGAGAGGGTTATTGTTGGTGACCTGTATTGCGATATCCCTTTGGGTCTCTATATAATCCGTGGGGAGAATGTTGTTTTGATCGGTGAGCTGGACTTGGAAAGAGAGGAACTTCCCCCACATATGACATGTGTTTCAGCTGCAGAAATTAGAAGGGCACAGAAAGCAGAAAGGGAGGCTACAGATCTGAAAGGAACCATGAGGAAAAGAATGGAGTTCCTTGACATGGACTAG 1218 0.4409 MEERCRGRMVRYRETEDWEERKGKFLSWMQIKLGGGKLENRNPNTYSSSTSYRTKQEPREEFSDWPHGLLAIGTFGNKDEIKAKPETQNTREEDDPSSSSEDIADFTAEDIGKLQKELTKLWRRKPNVEKEISELPLDRFLNCPSSLEVDRRISNALCSDSDDKEEDIEKTLSVILGKCKDICGDKTKKAIGKKSISFLLKKMFVCRSGFALPPNPRDTLQESRMEKLLRTILHKKIYSQSSSRASSMKRCLEDKIPKKRNEEEAEETTDDGCKWVKTDSEWPVDFYVSTSLASYLDKKLLVLLRDGRKLLGTLRSFDQFANAVLEGACERVIVGDLYCDIPLGLYIIRGENVVLIGELDLEREELPPHMTCVSAAEIRRAQKAEREATDLKGTMRKRMEFLDMD 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1411 405 SMART Sm3 290 358 IPR001163 -
Dere11g1411 405 MobiDBLite consensus disorder prediction 37 63 - -
Dere11g1411 405 SUPERFAMILY Sm-like ribonucleoproteins 290 360 IPR010920 -
Dere11g1411 405 Pfam LSM domain 291 357 IPR001163 -
Dere11g1411 405 FunFam U6 snRNA-associated Sm-like protein LSm1 289 402 - -
Dere11g1411 405 MobiDBLite consensus disorder prediction 76 103 - -
Dere11g1411 405 CDD LSm1 289 359 IPR034104 GO:0000956
Dere11g1411 405 MobiDBLite consensus disorder prediction 79 97 - -
Dere11g1411 405 Gene3D - 289 402 - -
Dere11g1411 405 ProSiteProfiles Sm domain profile. 287 362 IPR047575 GO:0003723
Dere11g1411 405 PANTHER OS03G0406300 PROTEIN 24 282 IPR044683 GO:0009630|GO:0040008
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1411 Dere-ChrDere11 26034561 26044006 Dispersed/Wgd