LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere11g1407	ATGGCCGTCGCTCCGGTGATCCTCGGGCCAACTCTCCTCTTCTTGTCTACCTTCTTTGTTGTTTTCCGATTGGTAAATTCCATGTCAGAAGCCGAAGCTTTGGTTAATTTCAAATCCTCATTCTCCGATTCTCAAGCTCTGAAAGATTGGGTGGTTAACGGTGTACCTTGCAAAGAAGGGAAAGAATGGGAAGGGGTTCTCTGCAACAACGGATCCGTCTCCGGGATTCGGATAGAAGGAATGGGGTTATCAGGGAAGATCGATGTAAATCCCTTGCTAGAAATCAAGGGTCTTCGAACTTTCAGCGTTATGAACAATTCTTTCTCGGGTACAATTCCGGAAATCAATAGGATAGGTTACTTGAGAGCTTTGTTCTTATCGGCAAATCAATTTTCTGGCGAGATTCCATCGGATTTCTTCCAGAAAATGAAGTCTCTGAGGAAACTATGGCTTTCCGATAACAAATTCAAGGGTCAGATTCCGTCGCGGATTCCTCTAGTTGTCGAGCTTCACCTCGAGAACAATCAGTTCAGCGGCACCATCCCGAATCTTAACAGAACGATGTTGGTAGAATTCAACGTGTCCAACAACAAATTGGAAGGCCAAATACCGTCGAGCTTATCAAAATTCGACGAGAGCTCTTTTTCCGGGAATACTGGGCTCTGTGGTGAGAAATTAAGCAAATCGTGTGAAGATTCAGCTGCACGGCCAAACGCCACAGGAAATACAGAACAAAATAACAATATCGGCGACGCGTCTGGTTCAAAATCAAGTAGTCATCGTCGCACACTGAAGATTGTCATCATTGTTATAGCATCATGCGCAGTGCTTCTCGCACTCATTGTTCTACTCTTTGTTCGATCTAGGGGAACGAACAAGGAGGAGGAAATACTTGAATCCGTTAGATCAGATAACAATAACGAAGAAGAAGCACCAGCAGCAGTAGCAGTTCAGGTTGCTGCACCAGTGAAGAAAGAAGATAGTAGTTTATCCAGAAAATCAAGCCGTAGTGGTTCCAGCAGAAAGGGATCCAGTAAGGGTGGCGGCGGCGGCGGCGGCGGTGTGGGAGAGCTTGTGGTGGTGAATAATGAAAAGGGTGTGTTTGGGATGCTGGATTTGATGAAGGCAGCTGCAGAAGTTCTGGGGAATGGAGGGTTTAGATCTTCTTATAAGGCTGTGATGGCTAATGGGGTTGCAGTGGTGGTGAAGAGGATGAGGGAGATGAATGTGTTGGGGAAAGATGGGTTTGATGCAGATATGAGGAAGCTTGGGAGTTTGAGACATAGGAATATCTTGACCCCTTTGGCTTATCATTATAGGAAGGATGAGAAGTTGTTGGTGTCTGAGTATGTTCCTAAAGGGAGTCTGCTGTATTTGTTGCATGGTGATCGTGGACCATCGCACGCTGAACTGGATTGGCCTGCCCGTTTAAAGATTATACGAGGGATTGCCGAAGGGATGCTTTATCTTCATACACAGCTTGCTTCCTCTGTTTTACCCCATGGCAATCTCAAGTCCAGCAATATTCTTCTTGGACCTGATTACGAGCCAATGCTTGTTGATTATGGATTAAGCCCCTTGATCAACTCTGCCAATCTAACACAAGCTCTATTTGCTTACAAGACTCCTGAAGCATCACAACAAGGCCAAGTTTCTCCCAAATCTGACGTTTATTGTCTCGGGGTCGTCATTCTTGAGATCCTCTCTGGGAAATTCCCTTCGCAGTATCTCCACAACGGCAATGGTGGAATTGATGTAGTTCAATGGGCTGCCTCCGCAATTTCAGAAGGAAGGGTATTAGAGATGCTTGATCCTCAACTTGCAAGCTCTACACATTCACTTGGTGAGATGGAGAGACTCCTCCATGTTGGCGTTGCTTGTACTGCAAGTAACCCCGAGATCCGATTGGACATGGCTGAAGCATTTAGAAGGATAGAGGAGATACAAACTGAAGGTGGCCCAGAATCAAGCTCACAAGGTCCCGATGTGTGGTCTCAGAGAAGCTTCGGATCAAGCAGCAATGGAAGCCAGCACCGAAACAGTGATAGTTTTGATTTTACCATTTCCTAA	2070	0.4585	MAVAPVILGPTLLFLSTFFVVFRLVNSMSEAEALVNFKSSFSDSQALKDWVVNGVPCKEGKEWEGVLCNNGSVSGIRIEGMGLSGKIDVNPLLEIKGLRTFSVMNNSFSGTIPEINRIGYLRALFLSANQFSGEIPSDFFQKMKSLRKLWLSDNKFKGQIPSRIPLVVELHLENNQFSGTIPNLNRTMLVEFNVSNNKLEGQIPSSLSKFDESSFSGNTGLCGEKLSKSCEDSAARPNATGNTEQNNNIGDASGSKSSSHRRTLKIVIIVIASCAVLLALIVLLFVRSRGTNKEEEILESVRSDNNNEEEAPAAVAVQVAAPVKKEDSSLSRKSSRSGSSRKGSSKGGGGGGGGVGELVVVNNEKGVFGMLDLMKAAAEVLGNGGFRSSYKAVMANGVAVVVKRMREMNVLGKDGFDADMRKLGSLRHRNILTPLAYHYRKDEKLLVSEYVPKGSLLYLLHGDRGPSHAELDWPARLKIIRGIAEGMLYLHTQLASSVLPHGNLKSSNILLGPDYEPMLVDYGLSPLINSANLTQALFAYKTPEASQQGQVSPKSDVYCLGVVILEILSGKFPSQYLHNGNGGIDVVQWAASAISEGRVLEMLDPQLASSTHSLGEMERLLHVGVACTASNPEIRLDMAEAFRRIEEIQTEGGPESSSQGPDVWSQRSFGSSSNGSQHRNSDSFDFTIS	689

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere11g1407	689	SUPERFAMILY	L domain-like	28	211	-	-
	Dere11g1407	689	MobiDBLite	consensus disorder prediction	651	689	-	-
	Dere11g1407	689	MobiDBLite	consensus disorder prediction	232	257	-	-
	Dere11g1407	689	Gene3D	Ribonuclease Inhibitor	141	231	IPR032675	-
	Dere11g1407	689	Pfam	Leucine rich repeat N-terminal domain	29	69	IPR013210	-
	Dere11g1407	689	MobiDBLite	consensus disorder prediction	317	351	-	-
	Dere11g1407	689	Gene3D	Transferase(Phosphotransferase) domain 1	451	663	-	-
	Dere11g1407	689	Gene3D	Phosphorylase Kinase; domain 1	374	450	-	-
	Dere11g1407	689	MobiDBLite	consensus disorder prediction	649	689	-	-
	Dere11g1407	689	Gene3D	Ribonuclease Inhibitor	29	140	IPR032675	-
	Dere11g1407	689	ProSiteProfiles	Protein kinase domain profile.	375	648	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Dere11g1407	689	MobiDBLite	consensus disorder prediction	233	257	-	-
	Dere11g1407	689	Pfam	Protein kinase domain	379	579	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Dere11g1407	689	SUPERFAMILY	Protein kinase-like (PK-like)	379	645	IPR011009	-
	Dere11g1407	689	PANTHER	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1	14	650	IPR046959	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere11g1407	Dere-ChrDere11	26008294	26011012	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere11g1407	12	648	Receptor kinase-like Gene Family	AT3G42880	45.636	0.0	548

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-III	Dere11g1407		Pkinase	1.3e-24	CL0016