Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1407 ATGGCCGTCGCTCCGGTGATCCTCGGGCCAACTCTCCTCTTCTTGTCTACCTTCTTTGTTGTTTTCCGATTGGTAAATTCCATGTCAGAAGCCGAAGCTTTGGTTAATTTCAAATCCTCATTCTCCGATTCTCAAGCTCTGAAAGATTGGGTGGTTAACGGTGTACCTTGCAAAGAAGGGAAAGAATGGGAAGGGGTTCTCTGCAACAACGGATCCGTCTCCGGGATTCGGATAGAAGGAATGGGGTTATCAGGGAAGATCGATGTAAATCCCTTGCTAGAAATCAAGGGTCTTCGAACTTTCAGCGTTATGAACAATTCTTTCTCGGGTACAATTCCGGAAATCAATAGGATAGGTTACTTGAGAGCTTTGTTCTTATCGGCAAATCAATTTTCTGGCGAGATTCCATCGGATTTCTTCCAGAAAATGAAGTCTCTGAGGAAACTATGGCTTTCCGATAACAAATTCAAGGGTCAGATTCCGTCGCGGATTCCTCTAGTTGTCGAGCTTCACCTCGAGAACAATCAGTTCAGCGGCACCATCCCGAATCTTAACAGAACGATGTTGGTAGAATTCAACGTGTCCAACAACAAATTGGAAGGCCAAATACCGTCGAGCTTATCAAAATTCGACGAGAGCTCTTTTTCCGGGAATACTGGGCTCTGTGGTGAGAAATTAAGCAAATCGTGTGAAGATTCAGCTGCACGGCCAAACGCCACAGGAAATACAGAACAAAATAACAATATCGGCGACGCGTCTGGTTCAAAATCAAGTAGTCATCGTCGCACACTGAAGATTGTCATCATTGTTATAGCATCATGCGCAGTGCTTCTCGCACTCATTGTTCTACTCTTTGTTCGATCTAGGGGAACGAACAAGGAGGAGGAAATACTTGAATCCGTTAGATCAGATAACAATAACGAAGAAGAAGCACCAGCAGCAGTAGCAGTTCAGGTTGCTGCACCAGTGAAGAAAGAAGATAGTAGTTTATCCAGAAAATCAAGCCGTAGTGGTTCCAGCAGAAAGGGATCCAGTAAGGGTGGCGGCGGCGGCGGCGGCGGTGTGGGAGAGCTTGTGGTGGTGAATAATGAAAAGGGTGTGTTTGGGATGCTGGATTTGATGAAGGCAGCTGCAGAAGTTCTGGGGAATGGAGGGTTTAGATCTTCTTATAAGGCTGTGATGGCTAATGGGGTTGCAGTGGTGGTGAAGAGGATGAGGGAGATGAATGTGTTGGGGAAAGATGGGTTTGATGCAGATATGAGGAAGCTTGGGAGTTTGAGACATAGGAATATCTTGACCCCTTTGGCTTATCATTATAGGAAGGATGAGAAGTTGTTGGTGTCTGAGTATGTTCCTAAAGGGAGTCTGCTGTATTTGTTGCATGGTGATCGTGGACCATCGCACGCTGAACTGGATTGGCCTGCCCGTTTAAAGATTATACGAGGGATTGCCGAAGGGATGCTTTATCTTCATACACAGCTTGCTTCCTCTGTTTTACCCCATGGCAATCTCAAGTCCAGCAATATTCTTCTTGGACCTGATTACGAGCCAATGCTTGTTGATTATGGATTAAGCCCCTTGATCAACTCTGCCAATCTAACACAAGCTCTATTTGCTTACAAGACTCCTGAAGCATCACAACAAGGCCAAGTTTCTCCCAAATCTGACGTTTATTGTCTCGGGGTCGTCATTCTTGAGATCCTCTCTGGGAAATTCCCTTCGCAGTATCTCCACAACGGCAATGGTGGAATTGATGTAGTTCAATGGGCTGCCTCCGCAATTTCAGAAGGAAGGGTATTAGAGATGCTTGATCCTCAACTTGCAAGCTCTACACATTCACTTGGTGAGATGGAGAGACTCCTCCATGTTGGCGTTGCTTGTACTGCAAGTAACCCCGAGATCCGATTGGACATGGCTGAAGCATTTAGAAGGATAGAGGAGATACAAACTGAAGGTGGCCCAGAATCAAGCTCACAAGGTCCCGATGTGTGGTCTCAGAGAAGCTTCGGATCAAGCAGCAATGGAAGCCAGCACCGAAACAGTGATAGTTTTGATTTTACCATTTCCTAA 2070 0.4585 MAVAPVILGPTLLFLSTFFVVFRLVNSMSEAEALVNFKSSFSDSQALKDWVVNGVPCKEGKEWEGVLCNNGSVSGIRIEGMGLSGKIDVNPLLEIKGLRTFSVMNNSFSGTIPEINRIGYLRALFLSANQFSGEIPSDFFQKMKSLRKLWLSDNKFKGQIPSRIPLVVELHLENNQFSGTIPNLNRTMLVEFNVSNNKLEGQIPSSLSKFDESSFSGNTGLCGEKLSKSCEDSAARPNATGNTEQNNNIGDASGSKSSSHRRTLKIVIIVIASCAVLLALIVLLFVRSRGTNKEEEILESVRSDNNNEEEAPAAVAVQVAAPVKKEDSSLSRKSSRSGSSRKGSSKGGGGGGGGVGELVVVNNEKGVFGMLDLMKAAAEVLGNGGFRSSYKAVMANGVAVVVKRMREMNVLGKDGFDADMRKLGSLRHRNILTPLAYHYRKDEKLLVSEYVPKGSLLYLLHGDRGPSHAELDWPARLKIIRGIAEGMLYLHTQLASSVLPHGNLKSSNILLGPDYEPMLVDYGLSPLINSANLTQALFAYKTPEASQQGQVSPKSDVYCLGVVILEILSGKFPSQYLHNGNGGIDVVQWAASAISEGRVLEMLDPQLASSTHSLGEMERLLHVGVACTASNPEIRLDMAEAFRRIEEIQTEGGPESSSQGPDVWSQRSFGSSSNGSQHRNSDSFDFTIS 689
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1407 689 SUPERFAMILY L domain-like 28 211 - -
Dere11g1407 689 MobiDBLite consensus disorder prediction 651 689 - -
Dere11g1407 689 MobiDBLite consensus disorder prediction 232 257 - -
Dere11g1407 689 Gene3D Ribonuclease Inhibitor 141 231 IPR032675 -
Dere11g1407 689 Pfam Leucine rich repeat N-terminal domain 29 69 IPR013210 -
Dere11g1407 689 MobiDBLite consensus disorder prediction 317 351 - -
Dere11g1407 689 Gene3D Transferase(Phosphotransferase) domain 1 451 663 - -
Dere11g1407 689 Gene3D Phosphorylase Kinase; domain 1 374 450 - -
Dere11g1407 689 MobiDBLite consensus disorder prediction 649 689 - -
Dere11g1407 689 Gene3D Ribonuclease Inhibitor 29 140 IPR032675 -
Dere11g1407 689 ProSiteProfiles Protein kinase domain profile. 375 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g1407 689 MobiDBLite consensus disorder prediction 233 257 - -
Dere11g1407 689 Pfam Protein kinase domain 379 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g1407 689 SUPERFAMILY Protein kinase-like (PK-like) 379 645 IPR011009 -
Dere11g1407 689 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 14 650 IPR046959 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere11g1407 Dere-ChrDere11 26008294 26011012 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1407 12 648 Receptor kinase-like Gene Family AT3G42880 45.636 0.0 548
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dere11g1407 Pkinase 1.3e-24 CL0016