Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1390 ATGGACGACGACGACAAGATCCAGTCGCCCTCGTCGCCGGCGAGTGGATCTTCGGGTTCGCCGAGGGCGAACGGTCGGATAACGGTGACAGTGGCTGCGCCGGCGCCGGCGCCGCCACAGAACAGTTTGGCACTAGCGCTTCCGGTCCATCACCAGCAGCCGAAGGGTAATGGTGGTGGTGGAGGGAGGGAGGATTGCTGGAGTGAAGGTGCGACGGCGGTGTTAATTGACGCGTGGGGGGAGAGGTACTTGGAGCTGAGCAGGGGGAATCTGAAGCAGAAGCACTGGAAGGAGGTTGCGGATATCGTGAGTAGCCGGGAGGATTATAGGAAGATGCCCAAGACTGATATTCAGTGCAAGAATCGGATCGACACGGTGAAGAAGAAGTACAAGTTGGAGAAGTCGAAGATCGCTGCTGGTGGCGGACCTAGTAAATGGCCGTTTTACGAGAGATTGGACCACTTGATAGGTCCGACTGCGAAAATTTCTGGCTCTACCGGCGGCGGCGGTTCTGCAGGAGCTAGTACGGCGAACAATCTGCAGACTCAGAAAGTGCCTCTGGGAATTCCAGTAGGAATTCGGGGTATGAATCAGAATCAGAGTCAGTATCAAGCTCATCAGCGGCTGCAGAAGCAGCAGCCACGGTTGAAGACACAGAGCCAGAAGATACAGTTCCGGAAGCGTGCTCCGGTGGACTCAGATTCGTCTCCGTCGGAGAGAGAACCGTCGCCGGTTTCAAGTGATAGTTTTCCTCCAGATTTGTATGAGAGGAAGAGACCTAGAGTGCCTAGAGAGATCAATAACGATGCTGTGGAAACAAAGGATAAGGCTTGGGGAGGTGCTGTCAGGGAATTGACGCAGGCGATACTGAAATTCGGGGAAGCCTATGAGCAAGCGGAGAGCGCGAAGATTCAGCAGGTGGTGGAAATGGAGAAGCAAAGGATGAAATTTGCGAAGGAGATGGAATTGCAGAGAATGCAGTTTTTTATGAAGACTCAATTGGAGATTTCGCAGCTGAAGCATGGGAGAAGAGGGGAAGGAAGCGCCAGCAACCATCATAGCAACATGAACAATAACAATAACAATCATAGTGACAGCGATAACCTGGCTAGTATGGATTAG 1122 0.5285 MDDDDKIQSPSSPASGSSGSPRANGRITVTVAAPAPAPPQNSLALALPVHHQQPKGNGGGGGREDCWSEGATAVLIDAWGERYLELSRGNLKQKHWKEVADIVSSREDYRKMPKTDIQCKNRIDTVKKKYKLEKSKIAAGGGPSKWPFYERLDHLIGPTAKISGSTGGGGSAGASTANNLQTQKVPLGIPVGIRGMNQNQSQYQAHQRLQKQQPRLKTQSQKIQFRKRAPVDSDSSPSEREPSPVSSDSFPPDLYERKRPRVPREINNDAVETKDKAWGGAVRELTQAILKFGEAYEQAESAKIQQVVEMEKQRMKFAKEMELQRMQFFMKTQLEISQLKHGRRGEGSASNHHSNMNNNNNNHSDSDNLASMD 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1390 373 MobiDBLite consensus disorder prediction 200 268 - -
Dere11g1390 373 MobiDBLite consensus disorder prediction 8 25 - -
Dere11g1390 373 MobiDBLite consensus disorder prediction 252 268 - -
Dere11g1390 373 Gene3D - 67 132 - -
Dere11g1390 373 Pfam Myb/SANT-like DNA-binding domain 64 155 IPR044822 -
Dere11g1390 373 MobiDBLite consensus disorder prediction 200 226 - -
Dere11g1390 373 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 36 345 IPR044823 -
Dere11g1390 373 MobiDBLite consensus disorder prediction 339 373 - -
Dere11g1390 373 MobiDBLite consensus disorder prediction 349 373 - -
Dere11g1390 373 FunFam trihelix transcription factor ASIL2 67 132 - -
Dere11g1390 373 MobiDBLite consensus disorder prediction 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1390 Dere-ChrDere11 25787545 25788666 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1390 1 353 Trihelix Transcription Factor Family AT3G14180 49.537 6.79e-108 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Dere11g1390 Myb_DNA-bind_4 3.5e-26 CL0123