Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1385 ATGGTGGAAATAATGGCTGATGGAGGAGAGAAAGGCAGTGACTTCTATGCGGTTCTGGGGTTGAATAAGCAATGCTCCGACTCAGAGCTCAGAAATGCTTATAAGAAACTTGCACTGAAATGGCACCCAGATCGTTGTTCAGCGTCGGGGAATTCCAAGTTCATAGAAGAAGCTAAGAAGAAGTTCCAGGCAATCCAGCAAGCCTATTCTGTTTTATCTGACGCAAACAAGAGGTTTCTGTACGACGTAGGACTGTATGATAGCGATGACGACGAAAATGGCATGGCTGAATTCTTGAACGAAATGGCAGCATTGATGAGCCAAACAAAGCCAAACGAAAATGGGGAGGAGAGCTTTGAGGAGTTGCAAGAGCTGTTTGAAGAATTGTTTGAAGATGACATTGTGTCAGGTGGAAGTAGCTGCTATGCTTCTGGGTGTTGTACTTCATCTACGTACGTGAGTTTCAGTGGAAGTTCTTCTTCTTCCAGCAAAAGCAGTTCCTCTGAGATCAACATTGGGAAGGCAGAGCAATCTTTCAGTTTCAATGGTGCCTACCAGAACTTCTGTTTAGGGATGGAGCAGCTCCAAGATAGGAAAAAGGGAAAGGGAGTAGGAGGAGGAGGAGGAGGATGTAGCAGTAGGCATAGCAGGCAGAACAGAAAGCGAAAGAATTGA 675 0.4533 MVEIMADGGEKGSDFYAVLGLNKQCSDSELRNAYKKLALKWHPDRCSASGNSKFIEEAKKKFQAIQQAYSVLSDANKRFLYDVGLYDSDDDENGMAEFLNEMAALMSQTKPNENGEESFEELQELFEELFEDDIVSGGSSCYASGCCTSSTYVSFSGSSSSSSKSSSSEINIGKAEQSFSFNGAYQNFCLGMEQLQDRKKGKGVGGGGGGCSSRHSRQNRKRKN 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1385 224 CDD DnaJ 14 74 IPR001623 -
Dere11g1385 224 Gene3D DnaJ domain 11 141 IPR036869 -
Dere11g1385 224 SUPERFAMILY Chaperone J-domain 12 86 IPR036869 -
Dere11g1385 224 SMART dnaj_3 13 77 IPR001623 -
Dere11g1385 224 Coils Coil 55 75 - -
Dere11g1385 224 MobiDBLite consensus disorder prediction 199 224 - -
Dere11g1385 224 Coils Coil 112 132 - -
Dere11g1385 224 PANTHER PUTATIVE, EXPRESSED-RELATED 6 200 - -
Dere11g1385 224 Pfam DnaJ domain 14 82 IPR001623 -
Dere11g1385 224 PRINTS DnaJ domain signature 16 34 IPR001623 -
Dere11g1385 224 PRINTS DnaJ domain signature 34 49 IPR001623 -
Dere11g1385 224 PRINTS DnaJ domain signature 57 77 IPR001623 -
Dere11g1385 224 ProSiteProfiles dnaJ domain profile. 14 85 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1385 Dere-ChrDere11 25749756 25756216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1385 16 82 C2H2 Transcription Factor Family AT1G74250 45.588 5.82e-11 59.7