Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1362 ATGGCTGACACCTTTGAGAACCCTAGCCCTAAGATTTCCGCTTACTATCAAACCAGGGCGGCACATCATGGTGTGATCACCAGCGACTGGCTCGCCCAAGCTCAGGCAGCCACCGAACAAAACACCGATAACGGGGGAGGATTTTCCGGTGGTGAAGTCGTGTCGGATTGCGACAAGCCGTTTAGTGTGATTGACGAGTTTAATAACTGGCGGAAACAGCCCGATTTGGCTGAGGCTGTGGCGGCGATTCGCGCTTTAGCGGCAATTATAAGGTCCAGTAAGGCTACGACGATGATGGAGCTGGAAATTGAACTCAAGAAAGCCTCTGATTCTCTCAAATCCTGGGATACAACCTCTATCTCTTTGACAGCAGGCTGTGATCTCTTTATGCGATATGTAACTAGGACTTCTGCATTACAATATGAAGACTTTAATTCAGCAAAGTCTCGCCTAATTGAACGTGCAGAAAAGTTTGGGGAAATCTCTTATAAGGCTCGCAAAATTATTGCAATGCTGAGTCAAGATTTTATATTTGATGGTTGTACAATTTTGGTTCATGGTTTTTCCAGAGTTGTCTTTGAAATTCTGAAACTGGCAGCACAAAATAAGAAACTCTTTCAGGTCTTCTGCACAGAGGGAAGACCAGACCAAACAGGTTTACGGTTTTCCAATGAGCTGGCCAAGCTTGATGTTCATGTGAAACTCCTATTAGACTCTGCAGTGGCGTATACTATGGATGACGTGGACATGGTATTGGTGGGGGCAGACGGAGTCGTTGAAAGTGGGGGCATAATTAACATGATGGGGACATACCAAATTGCAGTGGTTGCAGACAGTATGAATAAGCCGGTCTATGTTGCTGCTGAAAGCTATAAGTTTGCTCGTCTTTACCCTTTAGACCAGAAGGACTTGGCTCCTGCATTACGCCCAATTGATTTCGGGGTACCAATTCCATCCAAGGTTGACGTTGAAAGGTCAGCCCGGGATTACACTCCTCCTCAATATCTGACTCTGCTTTTCACAGATTTAGGTGTTCTTACTCCATCTGTAGTTAGCGATGAGCTGATCCAGTTATACTTATAG 1083 0.4543 MADTFENPSPKISAYYQTRAAHHGVITSDWLAQAQAATEQNTDNGGGFSGGEVVSDCDKPFSVIDEFNNWRKQPDLAEAVAAIRALAAIIRSSKATTMMELEIELKKASDSLKSWDTTSISLTAGCDLFMRYVTRTSALQYEDFNSAKSRLIERAEKFGEISYKARKIIAMLSQDFIFDGCTILVHGFSRVVFEILKLAAQNKKLFQVFCTEGRPDQTGLRFSNELAKLDVHVKLLLDSAVAYTMDDVDMVLVGADGVVESGGIINMMGTYQIAVVADSMNKPVYVAAESYKFARLYPLDQKDLAPALRPIDFGVPIPSKVDVERSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1362 360 FunFam Translation initiation factor eIF-2B subunit alpha 59 161 - -
Dere11g1362 360 Gene3D - 59 161 IPR042528 -
Dere11g1362 360 FunFam Translation initiation factor eIF-2B subunit alpha 164 360 - -
Dere11g1362 360 SUPERFAMILY NagB/RpiA/CoA transferase-like 76 359 IPR037171 -
Dere11g1362 360 Coils Coil 98 118 - -
Dere11g1362 360 Pfam Initiation factor 2 subunit family 74 348 IPR000649 GO:0044237
Dere11g1362 360 Gene3D - 164 360 IPR042529 -
Dere11g1362 360 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 22 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1362 Dere-ChrDere11 25473552 25477096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1362 1 360 Eukaryotic Initiation Factors Gene Family AT1G53880 82.222 0.0 587
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere11g1362 11 25473552 25477096 Dere11g1362 11 25473552 25477096 ECH