Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1357 ATGGTTTTCGACTTTCTCCTCTGCAAAGACTTCAACTCACGCATTGCTCCTTCTCACACTGATGCGGAGAAACTTAAAGGCAGGGAAGAGAATAAGTTACAGAGCCTCCCAATGGGTAGAAGAAAATCAATTGCAAAATGGTGCGTCTTTAATTTTATCTATGACATGGCAGTTTCTCTGGTGTCAGATCAATTGAATGAAGGCAAAGGACGCGTTCGAGAAGCTAGAGAAGGTTGGGGAAGGGACGTACGGAAGGTGTACAGAGCAATCGACAAATCTACTGGGAAGATTGTTGCCCTCAAGAAGACTCGCCTCCACGAGGACGAAGAAGGCGTGCCTCCCACCACTTTCCGTGAGGTTTCCTTTCTGCGTATGCTCTCTAGGGATCCCCATGTCGTCAGGTTGATGGATGTAAAACAAGGTCAGAACGAGGAAGGGAAGACAGTGCTATACTTGGTGTTTGAGTTCATGGACACCGATCTAAAAAAATTCATTCGAAGTTTCCGTCAAACTGGAGAAAACATCCCTGCTCATACAGTCAAACCCCATAACCTCTTGATGATCCGTAAGACCAAGATGCTGAAAATAGCTGATCTTGGACTGGCTCGAGCATTTACTGTGCCAATCAAGAAATACACTCATGAGATACTGACCCTATGGTATCGTGCTCCTGAAGTGCTTTTGGGAGCTACTCATTACTCAATGGCGGTGGATATTTGGCTTTTGGGAACACCAAATGAAGAGATGTGGCCAGGCGTTAGTAAGCTAATGAACTGGCATGAGTACCCCCAGGGGAGCCCTCAAAATCTGTCAAAGGTTGTTCCTAAATTGGATGAGCTTGGACTGGGTCTGCTCTCTGTATGGCTACCTCTTGGTGCTGCCTTTGATCTTTCATGTTTCTGCATAATTGACATTGTTTCATTTTCTTATTCTCAGCAAATGTTACAATACGAGCCTTCGAAGCGGATTTCTGCAAAGAGAGCAATGGAACACCCTTACTTTGATGATCTGGACAAGAAGAATCTTTAG 1029 0.45 MVFDFLLCKDFNSRIAPSHTDAEKLKGREENKLQSLPMGRRKSIAKWCVFNFIYDMAVSLVSDQLNEGKGRVREAREGWGRDVRKVYRAIDKSTGKIVALKKTRLHEDEEGVPPTTFREVSFLRMLSRDPHVVRLMDVKQGQNEEGKTVLYLVFEFMDTDLKKFIRSFRQTGENIPAHTVKPHNLLMIRKTKMLKIADLGLARAFTVPIKKYTHEILTLWYRAPEVLLGATHYSMAVDIWLLGTPNEEMWPGVSKLMNWHEYPQGSPQNLSKVVPKLDELGLGLLSVWLPLGAAFDLSCFCIIDIVSFSYSQQMLQYEPSKRISAKRAMEHPYFDDLDKKNL 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1357 342 SMART serkin_6 80 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g1357 342 SUPERFAMILY Protein kinase-like (PK-like) 85 337 IPR011009 -
Dere11g1357 342 Gene3D Transferase(Phosphotransferase) domain 1 243 342 - -
Dere11g1357 342 FunFam Cyclin-dependent kinase 4 77 158 - -
Dere11g1357 342 PANTHER CELL DIVISION PROTEIN KINASE 84 335 - -
Dere11g1357 342 Pfam Protein kinase domain 180 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g1357 342 Pfam Protein kinase domain 85 166 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g1357 342 Gene3D Transferase(Phosphotransferase) domain 1 173 242 - -
Dere11g1357 342 ProSiteProfiles Protein kinase domain profile. 72 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g1357 342 Gene3D Phosphorylase Kinase; domain 1 84 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1357 Dere-ChrDere11 25386531 25388565 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1357 85 342 Core Cell Cycle Gene Families AT1G20930 60.383 3.06e-121 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Dere11g1357 Pkinase 9.1e-18 CL0016