Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1355 ATGGAGACGCTTTCAGCAAAGGACGCGTTCGAGAAGCTAGAGAAGGTTGGGGAAGGGACGTACGGAAAGGTGTACAGAGCGATCGACAAATCTACTGGGAAGATCGTTGCCCTCAAGAAGACTCGTCTCCACGAGGACGAAGAAGGCGTCCCTCCCACCACTCTCCGTGAGGTTTCCATTCTGCGCATGCTCTCTAGGGATCCTCATGTCGTCAGGTTGTTGGATGTAAAACAAGGTCAGAACAAGGAAGGGAAGACAGTACTGTATTTGGTGTTTGAGTTCATGGACACCGATCTCAAAAAATTCATTCGTAGTTTCCGTCAAACTGGAGAAAACATTTCTGCTCATACAGTCAAAAGCTTGATGTACCAACTTTGCAAGGGCGTTGCTTTCTGCCACGGTCATGGAATCTTACATAGGGATTTGAAGCCCCATAACCTCTTGATGGACCGTAAGACCATGGTGCTGAAAATCGCTGATCTTGGACTGGCTCGAGCATATACTGTGCCAATCAAGAAATATACTCATGAGATACTGACCCTCTGGTATAGAGCTCCTGAAGTGCTTTTAGGAGCTACTCATTACTCAATGGCGGTGGATATTTGGTCTGTTGGCTGCATATTTGCCGAACTAGTTACAAAGCAAGCACTCTTCCCTGGTGATTCCGAGCTGCAACAACTCCTGCACATATTCAGGCTTTTGGGAACACCAAATGAAGAGATGTGGCCAGGTGTTAGTAAGCTAATGAACTGGCATGAGTACCCCCAGTGGAGCCCTCAAAATCTGTCAAAGGCTGTTCCTGATTTGGATGAGCTTGGACTTGATCTGCTCTCTCAAATGTTGCAATACGAGCCTTCGAAGCGAATTTCTGCGAAGAGAGCTATGGAACATCCATACTTTGATGATCTGGACAAGAAGAATCTTCTTTAG 930 0.4656 METLSAKDAFEKLEKVGEGTYGKVYRAIDKSTGKIVALKKTRLHEDEEGVPPTTLREVSILRMLSRDPHVVRLLDVKQGQNKEGKTVLYLVFEFMDTDLKKFIRSFRQTGENISAHTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMVLKIADLGLARAYTVPIKKYTHEILTLWYRAPEVLLGATHYSMAVDIWSVGCIFAELVTKQALFPGDSELQQLLHIFRLLGTPNEEMWPGVSKLMNWHEYPQWSPQNLSKAVPDLDELGLDLLSQMLQYEPSKRISAKRAMEHPYFDDLDKKNLL 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1355 309 Gene3D Transferase(Phosphotransferase) domain 1 98 308 - -
Dere11g1355 309 Gene3D Phosphorylase Kinase; domain 1 5 96 - -
Dere11g1355 309 ProSitePatterns Protein kinases ATP-binding region signature. 16 39 IPR017441 GO:0005524
Dere11g1355 309 PANTHER CELL DIVISION PROTEIN KINASE 8 301 - -
Dere11g1355 309 FunFam Cyclin-dependent kinase 2 98 307 - -
Dere11g1355 309 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672|GO:0006468
Dere11g1355 309 ProSiteProfiles Protein kinase domain profile. 10 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g1355 309 FunFam Cyclin-dependent kinase B2,2 6 96 - -
Dere11g1355 309 Pfam Protein kinase domain 10 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g1355 309 SUPERFAMILY Protein kinase-like (PK-like) 7 304 IPR011009 -
Dere11g1355 309 SMART serkin_6 10 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1355 Dere-ChrDere11 25369712 25371689 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1355 3 309 Core Cell Cycle Gene Families AT1G76540 84.039 0.0 548
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Dere11g1355 Pkinase 2.1e-71 CL0016