Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1337 ATGGAGAACGTTAGCTACCAAATCAATTATTCAAGCCCTTTAACTCATGGGCCACCGTCATTATCATCTTCTTCTTCTTCATCGCCTCACTCTCACTCTTCCTCGCACTTCTTCTCACCACCACACACTGCCTTCAACCTATTACATAGAAGAGAAACAGGTGAAGAAGCTCCTCTTCTGCTTTGCTTCTCATCTGGGTGCTCTTGCTTTTCCTGCAACAGTAGCATGGCTGAGGAACTGGATAAACCTTTGCTTGACCCTGAGAATTTCGGTCGAGAGGGTATTGATTTGGAGCGCATACCATTAGAAGAAGTTTTTGAGCAGCTAAGAACATCACATAGAGGACTTTCATCAGATGATGCCGAAGCTCGACTGCATATATTTGGCCCAAACAAGCTTGAAGAGAAGCCTGAGAATAAAATATTAAAGTTTCTAAGTTTCATGTGGAATCCTCTGTCATGGGTTATGGAAGCAGCTGCTGTGATGGCTATTGTCCTCGCTAATGGAGGAGGGGAGGGTCCTGACTGGCAGGACTTTGTAGGGATTATATGCCTACTGGTGATAAACTCCACAATTAGTTTTATTGAAGAAAATAATGCTGGGAATGCAGCAGCTGCACTGATGGCTCGTTTGGCTCCTAAAACGAAGGTTCTGAGAGATGGCCAATGGCAAGAGCAAGATGCAGCTATATTAGTACCTGGAGATATAATCAGCATAAAGCTGGGAGATATCATTCCAGCTGATGCTCGCCTTCTTGAAGGAGACCCACTTAAAATTGACCAGTCAGCCCTCACTGGAGAATCTCTACCTGTCACCAAGAGGACAGGAGATGAAGTCTTTTCTGGCTCAACATGTAAGCATGGAGAGATTGAAGCCGTAGTGATAGCAACAGGAGTTCAGACCTTTTTTGGAAAGGCAGCACACTTAGTTGACAGTACCGAAGTTGTTGGACATTTTCAGAAGGTCCTAACCTCAATTGGGAACTTCTGCATTTGCTCTATAGCTGTAGGGATGGTTCTTGAAATCATAGTAATGTTTCCTGTACAGCACCGTTCATATAGGGATGGAATCAACAACCTTCTTGTTCTCTTAATTGGAGGAATTCCCATAGCTATGCCAACAGTGTTATCTGTAACTCTTGCAATTGGCTCTCATCGACTATCACAGCAGGGAGCCATCACAAAAAGAATGACAGCAATTGAAGAAATGGCAGGCATGGATGTCCTGTGCAGTGATAAAACTGGAACTCTTACCCTGAATCGCCTCACTGTTGATCGAAACCTTGTAGAGGTCTTTAACAACAATATGGACAAGGATATGGTTATCCTTCTAGCAGCCAGAGCAGCTAGATTGGAAAATCAGGATGCCATTGATGCTGCCATCGTTAATATGCTAGCTGACCCAAAGGAGGCACGTGCAAATATCACTGAAGTCCATTTTCTACCGTTCAATCCAGTAGACAAACGCACTGCTATTACATATGTTGATTCTGATGGCAAATGGTATAGGGCCAGCAAAGGAGCTCCTGAACAGATTCTAGATATGTGCCAAGAGAAAGATGAAATTGCCGGAAAAGTTCATGCAATCATTGACAAATTTGCTGAAAGGGGCTTGCGATCTCTTGCAGTTGCTTACCAGGAAGTTCCTGAAAAGTCCAAGGATAGTCCTGGAGGTCCATGGACCTTTTGTGGGCTGTTGCCCTTGTTTGATCCTCCAAGACATGATAGTGCTGAGACCATAAGAAGAGCACTTAATCTCGGAGTCTGTGTTAAGATGATTACAGGGGATCAGTTGGCAATTGCAAAAGAGACAGGCCGAAGACTTGGTATGGGGACAAATATGTACCCTTCTTCATCATTGTTAGGCCGTAACAGAGATGAATATGAAGCTCTACCAGTAGACGAGCTTATTGAAAAGGCAGATGGCTTTGCTGGTGTATTTCCTGAACACAAGTATGAAATTGTGAAGATTTTACAAGAAAAGAAGCATGTAGTTGGAATGACAGGAGATGGGGTAAATGATGCACCAGCTTTAAAGAAAGCAGATATTGGAATTGCCGTGTCAGATTCTACAGATGCTGCAAGGAGTGCTGCTGATCTAGTCTTAACTGAGCCAGGCTTAAGTGTGATTGTCAGTGCTGTATTAACTAGCCGAGCCATATTTCAAAGAATGAAAAATTATACAATATACGCTGTCTCCATAACCATAAGGATAGTGCTTGGTTTTGTGCTTCTGGCATTGATTTGGGAGTATGATTTTCCACCTTTCATGGTCCTGATCATAGCGATACTGAATGATGGGACTATTATGACCATATCAAAAGATCGTGTAAAGCCATCTCCAACACCTGACAGTTGGAAGCTGCCAGAAATATTTGCCACTGGAATAGTCATTGGCACTTACCTTGCCTTGGTTACTGTTCTGTTCTACTGGACAGTAGTAAAGACCACTTTCTTCAAGACCCACTTCCATGTATCTTCCTTATCCAGTGACAGTGAGAAAGTTTCATCTGCTATATATCTACAAGTTAGCATCATAAGCCAGGCTTTGATTTTTGTAACACGAAGTCGAGGGTGGTCATTTCTAGAGAGACCTGGAGTTCTCTTGATGTGTGCCTTTGTTATAGCTCAACTGGTGGCCACTTTGATAGCAGTCTATGCGCATATCAGCTTTGCTAAAATTACCGGCATTGGATGGGGATGGGCTGGTATTATATGGCTATATAGTTTGATCTTCTATATACCTCTGGACATTATCAAGTTCACAGTTCGCTATATTTTGAGTGGAGAAGCATGGAATCTGTTATTTGATAGAAAGACTGCGTTTTCTTCTAAGAAAGACTATGGGAAGGAAGATAGGGCTGCAAAATGGGTTCTTTCTCAGAGAAGCCTACAAGGATTGATGGCCACAGACGTGGGGGCGAAAAATGGCATTAGTGGCATTAGAAGACAATCTTCTTCTTTGATTGCTGAACAGGCCAGAAGACGTGCAGAAATAGCTAGGCTGGGAGAGATGTACACTTTGAGAGGACATGTAGAGTCTGTGTTGAGACTGAAAAACTTGGACCTGAGTGTCATCCAATCAGCTTATACAGTCTAA 3099 0.4298 MENVSYQINYSSPLTHGPPSLSSSSSSSPHSHSSSHFFSPPHTAFNLLHRRETGEEAPLLLCFSSGCSCFSCNSSMAEELDKPLLDPENFGREGIDLERIPLEEVFEQLRTSHRGLSSDDAEARLHIFGPNKLEEKPENKILKFLSFMWNPLSWVMEAAAVMAIVLANGGGEGPDWQDFVGIICLLVINSTISFIEENNAGNAAAALMARLAPKTKVLRDGQWQEQDAAILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKRTGDEVFSGSTCKHGEIEAVVIATGVQTFFGKAAHLVDSTEVVGHFQKVLTSIGNFCICSIAVGMVLEIIVMFPVQHRSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLVEVFNNNMDKDMVILLAARAARLENQDAIDAAIVNMLADPKEARANITEVHFLPFNPVDKRTAITYVDSDGKWYRASKGAPEQILDMCQEKDEIAGKVHAIIDKFAERGLRSLAVAYQEVPEKSKDSPGGPWTFCGLLPLFDPPRHDSAETIRRALNLGVCVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGRNRDEYEALPVDELIEKADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVSDSTDAARSAADLVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFVLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLPEIFATGIVIGTYLALVTVLFYWTVVKTTFFKTHFHVSSLSSDSEKVSSAIYLQVSIISQALIFVTRSRGWSFLERPGVLLMCAFVIAQLVATLIAVYAHISFAKITGIGWGWAGIIWLYSLIFYIPLDIIKFTVRYILSGEAWNLLFDRKTAFSSKKDYGKEDRAAKWVLSQRSLQGLMATDVGAKNGISGIRRQSSSLIAEQARRRAEIARLGEMYTLRGHVESVLRLKNLDLSVIQSAYTV 1032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1337 1032 FunFam Plasma membrane ATPase 213 297 - -
Dere11g1337 1032 PANTHER CALCIUM-TRANSPORTING ATPASE 99 962 - -
Dere11g1337 1032 Pfam Cation transporter/ATPase, N-terminus 100 162 IPR004014 -
Dere11g1337 1032 Pfam haloacid dehalogenase-like hydrolase 406 682 - -
Dere11g1337 1032 FunFam Plasma membrane ATPase 422 569 - -
Dere11g1337 1032 SUPERFAMILY Calcium ATPase, transduction domain A 213 310 IPR008250 -
Dere11g1337 1032 Gene3D - 213 297 - -
Dere11g1337 1032 MobiDBLite consensus disorder prediction 11 35 - -
Dere11g1337 1032 Gene3D - 175 895 - -
Dere11g1337 1032 SUPERFAMILY HAD-like 406 715 IPR036412 -
Dere11g1337 1032 PRINTS H+-transporting ATPase (proton pump) signature 668 684 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Dere11g1337 1032 PRINTS H+-transporting ATPase (proton pump) signature 699 724 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Dere11g1337 1032 PRINTS H+-transporting ATPase (proton pump) signature 840 861 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Dere11g1337 1032 PRINTS H+-transporting ATPase (proton pump) signature 526 544 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Dere11g1337 1032 PRINTS H+-transporting ATPase (proton pump) signature 640 656 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Dere11g1337 1032 SUPERFAMILY Calcium ATPase, transmembrane domain M 96 927 IPR023298 -
Dere11g1337 1032 Gene3D - 407 705 IPR023214 -
Dere11g1337 1032 FunFam ATPase 4 plasma membrane-type 659 895 - -
Dere11g1337 1032 SFLD C1.7: P-type atpase like 392 720 - -
Dere11g1337 1032 SFLD p-type atpase 392 720 IPR044492 -
Dere11g1337 1032 PRINTS P-type cation-transporting ATPase superfamily signature 586 596 - -
Dere11g1337 1032 PRINTS P-type cation-transporting ATPase superfamily signature 410 424 - -
Dere11g1337 1032 PRINTS P-type cation-transporting ATPase superfamily signature 564 575 - -
Dere11g1337 1032 PRINTS P-type cation-transporting ATPase superfamily signature 260 274 - -
Dere11g1337 1032 PRINTS P-type cation-transporting ATPase superfamily signature 691 703 - -
Dere11g1337 1032 PRINTS P-type cation-transporting ATPase superfamily signature 668 687 - -
Dere11g1337 1032 NCBIfam plasma-membrane proton-efflux P-type ATPase 115 886 IPR006534 GO:0008553|GO:0016020|GO:0120029
Dere11g1337 1032 Gene3D - 422 569 IPR023299 GO:0000166
Dere11g1337 1032 SMART Cation_ATPase_N_a_2 96 168 IPR004014 -
Dere11g1337 1032 ProSitePatterns E1-E2 ATPases phosphorylation site. 412 418 IPR018303 -
Dere11g1337 1032 CDD P-type_ATPase_H 115 921 IPR006534 GO:0008553|GO:0016020|GO:0120029
Dere11g1337 1032 Pfam E1-E2 ATPase 211 389 - -
Dere11g1337 1032 Gene3D - 984 1032 - -
Dere11g1337 1032 NCBIfam HAD-IC family P-type ATPase 182 429 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Dere11g1337 1032 NCBIfam HAD-IC family P-type ATPase 643 753 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Dere11g1337 1032 FunFam Plasma membrane ATPase 562 716 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1337 Dere-ChrDere11 25217860 25228013 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1337 76 1032 Primary Pumps ATPases AT1G17260 80.669 0.0 1554