Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1334 ATGGAAACAAAAGTGGTAGCTGTGAAGCAGCTGGACCGAAATGGGATGAATGGCAGTAAGGACTTTCTTACAGAGGTTGCCGTTTTAAGTAACCTGAACCATGAAAATCTGGTGAATCTGGTTGGTTATTGTGCTGATGGAGATCAGCGTCTTTTGGTGTATGAATTCATGCCGGGGGGTTCTGTATACGACCAGCTTGAGGAAGGTAAGCCCCCATTGGATTGGTTCACCAGAATGAGAATAGCATCGGGTGCTGCGAGCGGACTAGAGTACTTGCACGACAAGACCAATCTCCCAGTTGTGTCCAACCTTATATCTCCTGGAGTTACGGGTACCTACGGTTACTCTGCTCCCGAGTATATAAGAACAGGTCACCTCACCTTGAAATCAGATGGCTATGGTTTTGGTGTTGTGTTGCTTGAGCTCATCACCGGACGACGAGCTATTGATACTACTAAGCCAAACGAGGAGCAAAATTTAGTTACATGGGTATATTACGTTGCACTTATACCTAGCGCCTACTTTGTATTACTCAAGTCTGTAGTTGTTAATACTTAA 558 0.4498 METKVVAVKQLDRNGMNGSKDFLTEVAVLSNLNHENLVNLVGYCADGDQRLLVYEFMPGGSVYDQLEEGKPPLDWFTRMRIASGAASGLEYLHDKTNLPVVSNLISPGVTGTYGYSAPEYIRTGHLTLKSDGYGFGVVLLELITGRRAIDTTKPNEEQNLVTWVYYVALIPSAYFVLLKSVVVNT 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1334 185 Pfam Protein tyrosine and serine/threonine kinase 4 96 IPR001245 GO:0004672|GO:0006468
Dere11g1334 185 Pfam Protein tyrosine and serine/threonine kinase 114 156 IPR001245 GO:0004672|GO:0006468
Dere11g1334 185 PANTHER OS07G0668900 PROTEIN 105 165 - -
Dere11g1334 185 Gene3D Phosphorylase Kinase; domain 1 1 57 - -
Dere11g1334 185 SUPERFAMILY Protein kinase-like (PK-like) 4 173 IPR011009 -
Dere11g1334 185 Gene3D Transferase(Phosphotransferase) domain 1 105 173 - -
Dere11g1334 185 Gene3D Transferase(Phosphotransferase) domain 1 58 104 - -
Dere11g1334 185 ProSiteProfiles Protein kinase domain profile. 1 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1334 Dere-ChrDere11 25106384 25108640 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1334 5 174 Glycoside Hydrolase AT3G07070 55.610 7.80e-69 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Dere11g1334 PK_Tyr_Ser-Thr 2.4e-17 CL0016