Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1326 ATGCCGGTAGGATTCAGATTCCATCCAACGGATGAAGAGCTTGTGGGTCACTATTTGAAGAACAAGTTGCTTGGTGATGGTTCCCTCACCCAGACTATTGCTGAGGTTGATGTTTGCAAGATGGAGCCTTGGGAATTACCAGCTTTTTCCAAAGTAAAGTCAGATGACCCTGAATGGTTCTTCTTCAGTCCTCGAGATTTAAAGTACTCAAACAGCAAGCGGTCTAACAGGGCTACTGTGGGTGGGTATTGGAAAGTCACTGGTAAGGAACGTAGGATCAAGACCAGAGGCACCAACAACGTTATTGGGATGAAGAAGACTTTGGTTTTCTATAAAGGTCGTGTTCCTCTTGGTATCAAGACCAATTGGGTTATTCATGAATATCATGCCATCACTATTCCTGATTCTCAGAGAACCTTTGTCTTATGTCGCTTGATGGAGAATACCGGAAAGAAAGCAGGAGGAAAAAATGCGTTGATCAATAATCAATTAGGTTACCACTTGGCTTCTAACTGTGAAAATCAAGAATCATTGGATAAAATTTCATGTGAATATTCTTCACCTGAATTATGTATGAATCCAATTCTTCAGACAACAGAATATGACTCTCCCTCCATACAACAAGAACCACCTTTCCAATATTATGGGAACAAAAATAGTAGTAATAAGTTTCTTATTGAAACTAGTGAAGTGGAGGATAACATTGATGAGTTTTGGAATTCAATTCCCATCAATGAAGATGTTTCCTTCAATGAAGAAAGATGTCATGCTTCTATTGATGACTTCGACCCATTAGAGTCATTTAGAGGAATAGACTTTGAATTAGTTCCAGCATGGTTAAAATTATGTTCTCCTAATGATATTGGAGAGCATAGCTACACTAGTTCATAA 891 0.3872 MPVGFRFHPTDEELVGHYLKNKLLGDGSLTQTIAEVDVCKMEPWELPAFSKVKSDDPEWFFFSPRDLKYSNSKRSNRATVGGYWKVTGKERRIKTRGTNNVIGMKKTLVFYKGRVPLGIKTNWVIHEYHAITIPDSQRTFVLCRLMENTGKKAGGKNALINNQLGYHLASNCENQESLDKISCEYSSPELCMNPILQTTEYDSPSIQQEPPFQYYGNKNSSNKFLIETSEVEDNIDEFWNSIPINEDVSFNEERCHASIDDFDPLESFRGIDFELVPAWLKLCSPNDIGEHSYTSS 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1326 296 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 205 - -
Dere11g1326 296 Pfam No apical meristem (NAM) protein 2 129 IPR003441 GO:0003677|GO:0006355
Dere11g1326 296 Gene3D NAC domain 10 153 IPR036093 GO:0003677|GO:0006355
Dere11g1326 296 SUPERFAMILY NAC domain 1 146 IPR036093 GO:0003677|GO:0006355
Dere11g1326 296 ProSiteProfiles NAC domain profile. 1 148 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1326 Dere-ChrDere11 25035589 25037800 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1326 1 155 NAC Transcription Factor Family AT4G35580 56.522 2.30e-57 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere11g1326 NAM 3.4e-36 No_clan