Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1314 ATGGCGAACCCAGCTCCTGTGCTGGAATTTATGCCTCTGGGCTTCAGATTCCGTCCAACCGATGAAGAGCTCGTGGGTCACTACCTGAAGTACAAATTGATGGGTGATGATTTCATTGTCCAGATTATCCCTGAGATTGACGTTTGCAAGCACGAGCCGTGGGATATACCTGGTCGTGTTCCTCGTGGCGTCAAGACTAATTGGGTTATTCATGAATACCATGCTGTTACATTTCCTCCTGAACTGAGGACCTTTGTTCTATGCCGGTTAATGAAGAAAGCAGAAGGGAGAACTGATGAATTAGTCTGTGATGAAAGGGAGCCAAGTAGCTATCCGGCTTCTGACTATGAAAATCCAGCAAGTTCAGATATAATTCCAAATGTACATTCTTTGCCTCTAGATTCAATCTTTCAGACAGTCCAGCCAGATAACTCTGACATGAACTTCGCACGGCAGTCTCCAATTGCCATTGAGCTGGAATTCTCCCCATTACCCAATTCCTATGTTGGAAACGATAACAACAGTGGACACTTTCCTTTGCAAACTACTGAAGAGGAAGACAATGCGTTTGTGGATTCAATTTGGGCTGAGGAGGATGTCTTCTTCAGTGAGGAAACGAAAAATGCTTTTGTCAATGACTCCAACCCCTCGGAGTCCTTGAGAATGGTGTACTATGGAAGCAGTGACACAGATGCTGAAGTTGTTTCTGCACGGTACGGAAATATTCTAGATACTTCAACAGTATCTTATGAAAATGCTGTTGGCACTTCTCAACCTCCTTCTTACCAAGAAGCAAGCAGAGAGGAAAAGGGCAGATCCTTCCAAGATGATTTGGACACTTCCTCTGGTGACTCAACCCCTGCTACACCATTCAAGATCAACTGTGTTAAAATTTCTAGCTCTCCTTCCACTCTAAGGACATGCAGAACTCAATATCAACCAAGATCAGCAAACTCTGTGTCCCAGAGAGCTGGGGGACGAAGATCTCAAGCACAGAGGAAGGTTTCAACCAAAGCAGCGTACCATCATGAGGCTCAGAAGGAAGAACCTGTGGAATCAAACAGCAATCAGACGAAAGCCCAGGTTTCCATTTCAAAAAATACTGTGGAAGCTCCAAGCAAGCAATCCTCTTATGTCAATGGAAGGGGTTCTTTCATCCACTTGGAGACACCATCAAGCCAAAACCTCAGTCCACCATCGGTATATCTTGTAAATGTCGTAATAGGGCTTTTTCTGTTTATAGTCATTGTTTGGGAAATTTTATCACGTGGGAGGTTCTGA 1281 0.4434 MANPAPVLEFMPLGFRFRPTDEELVGHYLKYKLMGDDFIVQIIPEIDVCKHEPWDIPGRVPRGVKTNWVIHEYHAVTFPPELRTFVLCRLMKKAEGRTDELVCDEREPSSYPASDYENPASSDIIPNVHSLPLDSIFQTVQPDNSDMNFARQSPIAIELEFSPLPNSYVGNDNNSGHFPLQTTEEEDNAFVDSIWAEEDVFFSEETKNAFVNDSNPSESLRMVYYGSSDTDAEVVSARYGNILDTSTVSYENAVGTSQPPSYQEASREEKGRSFQDDLDTSSGDSTPATPFKINCVKISSSPSTLRTCRTQYQPRSANSVSQRAGGRRSQAQRKVSTKAAYHHEAQKEEPVESNSNQTKAQVSISKNTVEAPSKQSSYVNGRGSFIHLETPSSQNLSPPSVYLVNVVIGLFLFIVIVWEILSRGRF 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1314 426 MobiDBLite consensus disorder prediction 250 264 - -
Dere11g1314 426 SUPERFAMILY NAC domain 7 93 IPR036093 GO:0003677|GO:0006355
Dere11g1314 426 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 12 56 - -
Dere11g1314 426 Gene3D NAC domain 20 61 IPR036093 GO:0003677|GO:0006355
Dere11g1314 426 MobiDBLite consensus disorder prediction 250 289 - -
Dere11g1314 426 ProSiteProfiles NAC domain profile. 11 197 IPR003441 GO:0003677|GO:0006355
Dere11g1314 426 Pfam No apical meristem (NAM) protein 12 59 IPR003441 GO:0003677|GO:0006355
Dere11g1314 426 MobiDBLite consensus disorder prediction 304 357 - -
Dere11g1314 426 MobiDBLite consensus disorder prediction 304 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1314 Dere-ChrDere11 24892408 24895140 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1314 8 58 NAC Transcription Factor Family AT1G33060 68.627 1.80e-19 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere11g1314 NAM 1.1e-10 No_clan