Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1307 ATGGCGGTAGGATACAGATTCTGTCCGACGGATGAAGAGCTTGTGGGTCACTATTTGAAGAACAAGTTGCTTGGTGATGGTTCCGTCACCCAGATTATTGCTGAGGTTGATGTTTGCAAGATGGAGCCTTGGGACTTACCAGCTTTTTCCAAAGTAAAGTCAGATGACCCAGAATGGTTCTTCTTCAGTCCTCGAGATTTAAAGTACACTAACAGCAATCGGTCTAACAGAGCAACCATGTGTGGGTATTGGAACGCCACCGGTAAGAAACGTAACATCAAGACCAAAGGTACCAACAATGTTATTGGGATAAAGAAGACTTTGATTTTCTATAAAGGTCGTGTTTCTCATAGTGTAAAAACTAATTGGATTATTCATGAATATTATGCACTTACCATTCTTGATTTTCAGGTATATTCTTTACCTGAAGTAGATATGGATTCAATTCTTCAGATAGTAGATTATGAATTTTCCTCTATACGGCAAGAACCACCTTCCCAATGTGCATTAGTTCCTAATGCCTATTGTGGAAATGAAAACAACAGTAGTAAGGTTCTTATTGAAACTACTGAAGTGGAAGACAACATTGATAAGTACTTCAATTCAATTCTCATCAATGAAGATGTTTTCTTCAATGATGAAAGATGA 648 0.3781 MAVGYRFCPTDEELVGHYLKNKLLGDGSVTQIIAEVDVCKMEPWDLPAFSKVKSDDPEWFFFSPRDLKYTNSNRSNRATMCGYWNATGKKRNIKTKGTNNVIGIKKTLIFYKGRVSHSVKTNWIIHEYYALTILDFQVYSLPEVDMDSILQIVDYEFSSIRQEPPSQCALVPNAYCGNENNSSKVLIETTEVEDNIDKYFNSILINEDVFFNDER 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1307 215 ProSiteProfiles NAC domain profile. 1 156 IPR003441 GO:0003677|GO:0006355
Dere11g1307 215 Pfam No apical meristem (NAM) protein 3 128 IPR003441 GO:0003677|GO:0006355
Dere11g1307 215 SUPERFAMILY NAC domain 2 130 IPR036093 GO:0003677|GO:0006355
Dere11g1307 215 Gene3D NAC domain 10 143 IPR036093 GO:0003677|GO:0006355
Dere11g1307 215 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 2 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1307 Dere-ChrDere11 24815264 24817263 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1307 1 128 NAC Transcription Factor Family AT4G35580 61.719 1.93e-53 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere11g1307 NAM 9.9e-34 No_clan