Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1300 ATGGACGCATACTCCTCTGGGGAAGAAGTGGTCGTTAAGACAGGAAAACCATTTACTGTTACGACAAGAAAACCATATACAATCACAAAGCAAAGAGAAAGATGGACTGAGGAGGAGCATAATAGGTTTCTAGAAGCTTTAAAGCTCTATGGGAGAGCATGGCAGCGCATTGAAGAACATATAGGAACAAAGACTGCTGTGCAAATCAGGAGCCATGCACAAAAATTCTTTTCAAAGTGTACATTTCATATAGCATCTACAGAATCAAACCTCATGTCAAGATATGACTAG 291 0.3986 MDAYSSGEEVVVKTGKPFTVTTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKCTFHIASTESNLMSRYD 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1300 96 Gene3D - 34 80 - -
Dere11g1300 96 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 27 81 IPR017930 -
Dere11g1300 96 Pfam Myb-like DNA-binding domain 32 75 IPR001005 -
Dere11g1300 96 ProSiteProfiles Myb-like domain profile. 27 77 IPR001005 -
Dere11g1300 96 NCBIfam myb-like DNA-binding domain, SHAQKYF class 30 79 IPR006447 GO:0003677
Dere11g1300 96 SMART sant 31 79 IPR001005 -
Dere11g1300 96 FunFam protein REVEILLE 6 isoform X1 34 81 - -
Dere11g1300 96 CDD SANT 34 77 IPR001005 -
Dere11g1300 96 ProSiteProfiles SANT domain profile. 30 81 IPR017884 -
Dere11g1300 96 PANTHER SWI/SNF COMPLEX-RELATED 20 81 - -
Dere11g1300 96 SUPERFAMILY Homeodomain-like 26 79 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1300 Dere-ChrDere11 24678185 24681418 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dere11g1300 Myb_DNA-binding 9.2e-15 CL0123