Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1297 ATGTCTAATACATCACAAACCCATCAAGAACTCCTCACTTTTAAATCAAAGCGACAAATTACAGAAGATCACCATGGAAATAACGATGATGAAGATCATGAAAGCTTTTCCTACGCTATGCAGCTGGTGAACTCTGTGGTGCTTCCGATGGCCTTGCAAACTGCTATTGAGCTCGGAGTGTTCGAAGAAATGTCCAAGAGAGGTCCAGGTGTCGAACTCTCCGCAAAGGACATTGCGACCCAGATTTCCAGAAAGAACCCAGAAGCACCCACAATGCTGGATCGAATCCTGATGCTCCTGGCTTGTCACTCTGTGATTAATTGCTTTGTTGTTACTGATACTGAACATGAAGGGGCTGGTTCTTCTCAGAGGCTTTACAGTTTGAACTCTGTATCTCAGTATTTCGTGCGCAATGATGATGGGGCTTCTCTGGGGCCTCTCATGGCCTTAGTTCAAGACAAGGTTTTCTTACAAAGCTGGTCGGAATTGAAAGAGGCAATAGTGGAAGGAGGCATACCCTTCAACAGATTCCATGGGATGCATGCCTTTGAGTATCCGAGGTTGGATCCCAGGTTTAATCAGTCTATACTTCATGATTGGAGCGATGAACAATGCTTGAAACTATTAAAGAACCGCTATAATGCCGTTGGGGACGATGGAAGAGTGATTGTAGTGGAGGCAGTTCTTCCCATTAAGCCTGAGACTATTTCTACAGTGAAGACCACGTGCCAAGGTGATGTTCTTATGATGACTCAGAACCCAGGTGGGAGGGAGAGAAATCAACAACAACTTATGGATCTGGCCATTGGATCTGGTTTTAGTGGCATTAGATTTGATCCTTTTGTTTGTGACCTTTGGGTTATGGAGTTCTTCAAGTAG 879 0.446 MSNTSQTHQELLTFKSKRQITEDHHGNNDDEDHESFSYAMQLVNSVVLPMALQTAIELGVFEEMSKRGPGVELSAKDIATQISRKNPEAPTMLDRILMLLACHSVINCFVVTDTEHEGAGSSQRLYSLNSVSQYFVRNDDGASLGPLMALVQDKVFLQSWSELKEAIVEGGIPFNRFHGMHAFEYPRLDPRFNQSILHDWSDEQCLKLLKNRYNAVGDDGRVIVVEAVLPIKPETISTVKTTCQGDVLMMTQNPGGRERNQQQLMDLAIGSGFSGIRFDPFVCDLWVMEFFK 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1297 292 FunFam Caffeic acid 3-O-methyltransferase 16 135 - -
Dere11g1297 292 Pfam Dimerisation domain 50 101 IPR012967 GO:0046983
Dere11g1297 292 Pfam O-methyltransferase domain 192 274 IPR001077 GO:0008171
Dere11g1297 292 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 292 IPR016461 GO:0008168
Dere11g1297 292 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 141 195 IPR029063 -
Dere11g1297 292 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 195 289 IPR029063 -
Dere11g1297 292 SUPERFAMILY "Winged helix" DNA-binding domain 29 138 IPR036390 -
Dere11g1297 292 Gene3D Vaccinia Virus protein VP39 136 194 IPR029063 -
Dere11g1297 292 Gene3D Vaccinia Virus protein VP39 195 292 IPR029063 -
Dere11g1297 292 PANTHER O-METHYLTRANSFERASE 39 193 IPR016461 GO:0008168
Dere11g1297 292 Gene3D - 18 135 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1297 Dere-ChrDere11 24625993 24628895 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1297 186 286 Monolignol Biosynthesis Gene Families AT5G54160 42.574 4.96e-23 95.5