Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1295 ATGGAAGAATCCGATGGAAATGGATATGATGCATTAGATATGAAGGATGATTATTTGGTTGAACGGGGGTACCAAGTAGCACAGGGAGTGTTAGCAGGGAGACCTTTACATTTGTTCAAACAAAATAACGCAATTTTGGAAGGTGGCATTGCATTCAATAAGGTGCAAGGATTGCATGCTTTTGAGTATCCGAGCTTGGACTTGAGGTTCAATAGAGTAATTAACAAGGTAACGGTGAATCAAACCATTATAGTTGTAAAGAAGCTTCTTGAAGTCTACAATGGTTTGGATGGCATCAATAGACTTGTGGATGTTGGTGGTGGTCTTAAGATCACTTTAAGATACCCTCATATTCAAGGCTTCAACTTCAACTTGCCTCATGTCTTACAACATGCTCCTCCCTATCCTGTGGATTGGATTGTACAGTCATGGATTCTTCATGATTGGAGCAACGAATTGTGCTTGAAGCTATTGAAGAACTGCTATAATGCCATTCCTGATGATGGAAAGGTGATAGTGGTGGATGCAGTTTATCACAAAATACCAGACACTTCTGCTGCTGTGAAGAGCACATCCCAGCTTGATTTACACACGATGTTACAGAACCCAGGAGGTAAAGAGCGAAGTGAACAAGAGTTCATGGATTTAGAATCATTAGCTGGGTTTAGAGTGGAACATATGGGAGGAGATATGTTTGAAAGTGTGCCTGAAGGAGATGCCATCCTTATGAAGTGGATACTTCATGATTGGAGCGATGAACATTGCTTGAAGCTGTTGAAGAACTGCTATAAGGCCATTCCTAATGATGGAAAGGTGATAGCGGTGGAAGCAATTTTTCCTATAGTACTAGAAACTTGTGCAGTAGCTAAGAGCACTGCCCAACTTGATGTGCTGATGATGACACAGTACCAAGGAGGTGAAGAGCGAAGTGAACAAGAGTTCATGGATTTGGCCACGTCAGCTGGGTTTAGTGGCATTAGATATGAATGA 990 0.4162 MEESDGNGYDALDMKDDYLVERGYQVAQGVLAGRPLHLFKQNNAILEGGIAFNKVQGLHAFEYPSLDLRFNRVINKVTVNQTIIVVKKLLEVYNGLDGINRLVDVGGGLKITLRYPHIQGFNFNLPHVLQHAPPYPVDWIVQSWILHDWSNELCLKLLKNCYNAIPDDGKVIVVDAVYHKIPDTSAAVKSTSQLDLHTMLQNPGGKERSEQEFMDLESLAGFRVEHMGGDMFESVPEGDAILMKWILHDWSDEHCLKLLKNCYKAIPNDGKVIAVEAIFPIVLETCAVAKSTAQLDVLMMTQYQGGEERSEQEFMDLATSAGFSGIRYE 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1295 329 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 40 226 IPR029063 -
Dere11g1295 329 Gene3D - 50 89 IPR036388 -
Dere11g1295 329 Gene3D Vaccinia Virus protein VP39 71 223 IPR029063 -
Dere11g1295 329 PIRSF O-mtase 223 329 IPR016461 GO:0008168
Dere11g1295 329 PIRSF O-mtase 34 224 IPR016461 GO:0008168
Dere11g1295 329 PANTHER O-METHYLTRANSFERASE 39 222 IPR016461 GO:0008168
Dere11g1295 329 Pfam O-methyltransferase domain 43 135 IPR001077 GO:0008171
Dere11g1295 329 Pfam O-methyltransferase domain 223 324 IPR001077 GO:0008171
Dere11g1295 329 Gene3D Vaccinia Virus protein VP39 224 328 IPR029063 -
Dere11g1295 329 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 329 IPR016461 GO:0008168
Dere11g1295 329 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 223 328 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1295 Dere-ChrDere11 24579367 24590384 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1295 224 327 Monolignol Biosynthesis Gene Families AT5G54160 54.808 5.72e-37 134