Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1287 ATGGCCCAGACGTTGAAATCTAATGGCGCAAAATTAAATGACCTCGATCAAGAAGAAGAAAGCTTCTGCTACGCCAAGCAACTGGTGATGTCCAGTGTGTTGCCAATGACGTTGCAAACGACATTTGAGCTTGGCGTTTTCGACATTATAGCCAAAGCCGGAGAAGGCGCCAAGCTGTCTGCCAACGACATCGCGTATCAGCTTCCAACAAAGAACCCAGACGCACCCAGAATGCTAGATCGCATTCTTGGCCTCCTCGCTACTTTCTCTTTGCTCCATTGCTCTTCTGCTGCTGATGCGGACAAAGAAGGAAGTGGGTCCACTAAGTACCACAGGCTCTATAGCCTCGCTCCTGCCTCCAAGTTCTTCGCTCGCGATGCTGATGGTATGTCTTTGGGGCCCCTCAGGACCTTGATTCAACACAAGGCCTTCTTGGAAACCTGGTTCCATCTGAAAGACGCAATTCTGGAAGGAGGAATAGCTTTTGAAAGGGCTCATCAAGGCATGCATCAGTTTGAGTACCTTAGCGTTGACTCTGAGTTCAATCAACTTTTCAACACAGCATTGATCGATCACACCTCAATTGTTATGAAGAAGGTTCTTGAATCCTACAAAGGTGTAGAACACGTTGCAGGAGATATGTTCGAGAGTGTACCCAAGGCTGATGCCATTTTTATGAAGTGCAACTTCGAAATTGATGTATTCATGATGGCTCAAGATCCAGGAGGCAAAGAACGAACCGAGCATAAATTCATTGAACTCGCAAAAGCTGCTGGATTTAGGGGCGTTCGATACGAATGTCATGTCCGTAATTTCTGGGTTATTGAGTTCTTCAAGTAG 840 0.4655 MAQTLKSNGAKLNDLDQEEESFCYAKQLVMSSVLPMTLQTTFELGVFDIIAKAGEGAKLSANDIAYQLPTKNPDAPRMLDRILGLLATFSLLHCSSAADADKEGSGSTKYHRLYSLAPASKFFARDADGMSLGPLRTLIQHKAFLETWFHLKDAILEGGIAFERAHQGMHQFEYLSVDSEFNQLFNTALIDHTSIVMKKVLESYKGVEHVAGDMFESVPKADAIFMKCNFEIDVFMMAQDPGGKERTEHKFIELAKAAGFRGVRYECHVRNFWVIEFFK 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1287 279 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 128 277 IPR029063 -
Dere11g1287 279 Gene3D Vaccinia Virus protein VP39 206 228 IPR029063 -
Dere11g1287 279 Pfam Dimerisation domain 36 87 IPR012967 GO:0046983
Dere11g1287 279 SUPERFAMILY "Winged helix" DNA-binding domain 17 126 IPR036390 -
Dere11g1287 279 Pfam O-methyltransferase domain 148 205 IPR001077 GO:0008171
Dere11g1287 279 PANTHER O-METHYLTRANSFERASE 28 203 IPR016461 GO:0008168
Dere11g1287 279 Gene3D Vaccinia Virus protein VP39 230 279 IPR029063 -
Dere11g1287 279 Gene3D Vaccinia Virus protein VP39 124 205 IPR029063 -
Dere11g1287 279 Gene3D - 3 123 IPR036388 -
Dere11g1287 279 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 26 279 IPR016461 GO:0008168
Dere11g1287 279 FunFam Caffeic acid 3-O-methyltransferase 4 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1287 Dere-ChrDere11 24401170 24402614 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1287 18 279 Monolignol Biosynthesis Gene Families AT5G54160 35.775 5.41e-69 216