Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1284 ATGGCAAAACGAGCCAATCAGTATGGTGCCGTGTCCCTGACGTTGAAATCTAACGGCGCAAAATTAAATGACCTCGATCAAGAAGAAGAAAGCTTCTGCTACGCCAAGCAACTGGTGATGTCCAGTGTGCTGCCAATGACGTTGCAAACGACATTTGAGCTTGGCGTTTTCGACATTATAGCCAAAGCCGGAGAAGGCGCCAAGCTGTCTGCCAACGACATCGCGCATCAGCTTCCAACAAAGAACCCAGACGCACCCAGAATGCTAGATCGCATTCTTGGCCTCCTCGCTACTTTCTCTTTGCTCCATTGCTCTTCTGCTGCTGATGCGGACAAAGAAGGAAGTGGGTCCACCAAGTACCACAGGCTCTATAGCCTCGCTCCTGCCTCCAAATTCTTCGCTCGCGATGCTGATGGTATGTCTTTGGGGCCCCTCATGACCTTGATTCAACACAAGGCCTTCTTGGAAACCTGGTTCCATCTGAAAGACGCAATTCTGGAAGGAGGAATAGCTTTTGAAAGGGCTCATCAAGGCATGCATCAGTTTGAGTACCTTAGCGTTGACTCTGAGTTCAATCAACTTTTCAACACAGCATTGATCGATCACACCTCAATTGTTATGAAGAAGGTTCTTGAATCCTACAAAGGTTTTGAGCACCTCAACTCCATTGTGGATGTCGGGGGTGGCCTTGGGCATTGCCTCAGCTTGATCACTTCCAAGTACCCTCATCTTAAGGCTACCAATTTTGACTTGCCTCATGTCATCCAACATGCCTCTCCCTATCCTGGTGTAGAACACGTTGCAGGAGATATGTTCGAGAGTGTACCCAAGGCTGATGCCATTTTTATGAAGTGGATTCTTCATGACTGGAGCGACGAAAAGTGCTTAAAGCTAATGAAAAACTGCTTCGAGGCCACTCCCGAGGATGGGAAGGTGATTGTAGTGGAAACAGGCATATCGGCTATGCCTGAGACCACTGATTCTGTAAAGTGCAACTTCGAAATTGATGTATTCATGATGGCTCAAGATCCAGGAGGCAAAGAACGAACCGAGCATGAATTCGTTGAACTCGCAAAAGCTGCTGGATTTAGGGGCGTTCGATACGAATGTCATGTCCGTAATTTCTGGGTTATTGAGTTCTTCAAGTAG 1149 0.4752 MAKRANQYGAVSLTLKSNGAKLNDLDQEEESFCYAKQLVMSSVLPMTLQTTFELGVFDIIAKAGEGAKLSANDIAHQLPTKNPDAPRMLDRILGLLATFSLLHCSSAADADKEGSGSTKYHRLYSLAPASKFFARDADGMSLGPLMTLIQHKAFLETWFHLKDAILEGGIAFERAHQGMHQFEYLSVDSEFNQLFNTALIDHTSIVMKKVLESYKGFEHLNSIVDVGGGLGHCLSLITSKYPHLKATNFDLPHVIQHASPYPGVEHVAGDMFESVPKADAIFMKWILHDWSDEKCLKLMKNCFEATPEDGKVIVVETGISAMPETTDSVKCNFEIDVFMMAQDPGGKERTEHEFVELAKAAGFRGVRYECHVRNFWVIEFFK 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1284 382 FunFam Caffeic acid 3-O-methyltransferase 15 133 - -
Dere11g1284 382 Gene3D Vaccinia Virus protein VP39 134 382 IPR029063 -
Dere11g1284 382 Pfam O-methyltransferase domain 158 364 IPR001077 GO:0008171
Dere11g1284 382 CDD AdoMet_MTases 223 315 - -
Dere11g1284 382 Gene3D - 16 133 IPR036388 -
Dere11g1284 382 FunFam Caffeic acid O-methyltransferase 134 382 - -
Dere11g1284 382 SUPERFAMILY "Winged helix" DNA-binding domain 27 136 IPR036390 -
Dere11g1284 382 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 36 382 IPR016461 GO:0008168
Dere11g1284 382 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 138 380 IPR029063 -
Dere11g1284 382 PANTHER O-METHYLTRANSFERASE 38 367 IPR016461 GO:0008168
Dere11g1284 382 PIRSF O-mtase 13 382 IPR016461 GO:0008168
Dere11g1284 382 Pfam Dimerisation domain 46 97 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1284 Dere-ChrDere11 24369634 24371669 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1284 28 382 Monolignol Biosynthesis Gene Families AT5G54160 51.268 9.85e-133 382