Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1281 ATGGCCCAGACGTTGAAATCTAATGGCGCAAAATTAAATGACCTCGATCAAGAAGAAGAAAGCTTCTGCTACGCCAAGCAACTGGTGATGTTCAGTGTGCTGCCAATGACGTTGCAAACGACATTTGAGCTTGGCGTTTTCGACATTATAGCCAAAGCCGGAGAAGGCGCCAAGCTGTCTGCCAACGACATAGCGCATCAGCTTCCAACGAAGAACCCAGACGCACCCAGAATGCTAGATCGCATTCTTGGCCTCCTCGCTACTTTCTCTTTGCTCCATTGCTCTTCTGCTGCTGATGCGGACAAAGAAGGAAGTGGGTCCACTAAGTACCACAGGCTCTATAGCCTCGCTCCTGCCTCCAAGTTCTTCGCTCGCGATGCTGATGGTATGTCTTTGGGGCCCCTCATGACCTTGATTCAACACAAGGCCTTCTTGGAAACCTGGTTCCATCTGAAAGACGCAATTCTGGAAGGAGGAATAGCTTTTGAAAGGGCTCATCAAGGCATGCATCAGTTTGAGTACCTTAGCGTTGACTCTGAGTTCAATCAACTTTTCAACACAGCATTGATCGATCACACCTCAATTGTTATGAAGAAGGTTCTTGAATCCTACAAAGGTGTAGAACACGTTGCAGGAGATATGTTCGAGAGTGTACCCAAGGCTGATGCCATTTTTATGAAGTGGATTCTTCATGACTGGAGCGACGAAAAGTGCTTAAAGCTATTGAAAAACTGCTTCGAGGCCACTCCCGAGGATGGGAAGGTGATTGTAGTGGAAACAGGCATATCGGCTATGCCTGTGACCACTGCTTCTGTAAAGTGCAACTTCGAAATTGATGTATTCATGATGGCTCAAGATCCAGGAGGCAAAGAACGAACCGAGCAAGAATTCATTGAACTCGCAAAAGCTGCTGGATTTAGGGGCGTTCGATACGAATGTCATGTCCGTAATTTCTGGGTTATTGAGTTCTTCAAGTCTAGATTTACTACATACAAATGGAGTTATTGTATAAAACAAATACGGGTCGAATTCCATGTTCATGCTGTCAGCTTCTTCAAACCCTTCCTAGTCTATGCCAACACCATAGCCTTTGGCGGTGCCGGTGGCGGCTCTGCCACATTCTTTGGAGCCACAGTTGAGGGAGAAAGGCATAGCGTCACAGAAGGGGAAGGTGGCTTAATAACTGTGGTGCTATTAGAATTTGAAAGCCATGGAGGAAGCATAACTGATGCAGGAGTCGGTGCATCTGTGTGA 1254 0.4673 MAQTLKSNGAKLNDLDQEEESFCYAKQLVMFSVLPMTLQTTFELGVFDIIAKAGEGAKLSANDIAHQLPTKNPDAPRMLDRILGLLATFSLLHCSSAADADKEGSGSTKYHRLYSLAPASKFFARDADGMSLGPLMTLIQHKAFLETWFHLKDAILEGGIAFERAHQGMHQFEYLSVDSEFNQLFNTALIDHTSIVMKKVLESYKGVEHVAGDMFESVPKADAIFMKWILHDWSDEKCLKLLKNCFEATPEDGKVIVVETGISAMPVTTASVKCNFEIDVFMMAQDPGGKERTEQEFIELAKAAGFRGVRYECHVRNFWVIEFFKSRFTTYKWSYCIKQIRVEFHVHAVSFFKPFLVYANTIAFGGAGGGSATFFGATVEGERHSVTEGEGGLITVVLLEFESHGGSITDAGVGASV 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1281 417 Pfam O-methyltransferase domain 205 307 IPR001077 GO:0008171
Dere11g1281 417 Pfam Dimerisation domain 36 87 IPR012967 GO:0046983
Dere11g1281 417 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 325 IPR016461 GO:0008168
Dere11g1281 417 Gene3D Vaccinia Virus protein VP39 205 325 IPR029063 -
Dere11g1281 417 Gene3D Vaccinia Virus protein VP39 124 204 IPR029063 -
Dere11g1281 417 SUPERFAMILY "Winged helix" DNA-binding domain 17 126 IPR036390 -
Dere11g1281 417 FunFam Caffeic acid 3-O-methyltransferase 4 123 - -
Dere11g1281 417 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 128 323 IPR029063 -
Dere11g1281 417 Gene3D - 6 123 IPR036388 -
Dere11g1281 417 PANTHER O-METHYLTRANSFERASE 207 310 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1281 Dere-ChrDere11 24322194 24326480 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1281 18 325 Monolignol Biosynthesis Gene Families AT5G54160 43.099 4.50e-99 298