Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1269 ATGCGAAAGATAAGCGTGGTGATTAGCAGTACTAGCAACATGGACACAGAAAGATCTCAGCACACACAAATTATTGAAATCAGTGGCGATTTTCCTGATGGACCAAGAAATCCTGGAGGAAGTAAAATTTGTGGAGAAGCACCATGTGGGTTTGCAGATGCTGGGTCAATCTCTAAGGATTCCAAAGAACGATCGATATCGATGCGAAAGCTTTTGGTTGCTGTGGTGCTCTGTTTAATTTTCATGAGCGTCGAAGTAGCTGGTGGCATTAAAGCCAATAGTCTGGCTATATTGACTGATGCAGCACATTTGCTTTCAGATGTTGCAGCCTTTGCCATCTCTTTGTTCTCTTTATGGGCTGCTGGATGGGAAGCCAATCCCCGTCAGTCATATGGATTTTTTCGAATAGAGATTCTTGGTGCTTTGGTTTCCATCCAACTAATATGGCTGCTTGCAGGGATTCTGGTGTACGAAGCCATTGTAAGAATCATTGATGGTTCTCGTGAGGTGGATGGCTTCTTAATGTTTTTGGTTGCTGCATTTGGTCTGGTGGTTAATATTATCATGGCTGTGTTATTGGGTCATGATCACGGCCATGGACATGATGATCATGATCATGGTTTAGGCCATGGCCACAGCCATAGCCATGGCCATGGGTTTAAAGTGTCTACCCACCATGATCATGACCATGATGATCATCATCATGAAACAAATCCAAAAGATGAGCATCATCATCATCATTCTTGTGAAGATGATAAGCACCATCATGCTCATGACGAAGCAGCTGAACCATTTCTTGGTGGATCAAAAGACAAACTGGAAAAGAAGAGGCGATGGAACATAAATGTTCAGGGGGCGTATCTCCATGTACTTGGGGACTCAATCCAGAGCATTGGGGTAATGATTGGGGGAGCAATCATATGGTACAACCATGAGTGGCAAATAGTTGATCTAATTTGCACCCTTATCTTTTCCGTAATTGTTTTGGGGACAACTATCAATATGCTACGAAGCATACTTGAAGTTCTGATGGAGAGCACACCACGTGAGATTGATGCAACTAAGCTCGAAAGGGGGCTGTTAGACATGGATGAAGTGGTGGCTGTTCATGAGCTGCATATATGGGCAATTACAGTGGGGAAGATTTTGCTGGCTTGCCATGTTAAAATCAGACCTGAAGCAAATGCAGATATGGTGCTGGACAAGGTTATAGATTATATTAGACGGGTTTATAATATCAGCCATGTAACTATACAGATAGAGCGTTAG 1269 0.4303 MRKISVVISSTSNMDTERSQHTQIIEISGDFPDGPRNPGGSKICGEAPCGFADAGSISKDSKERSISMRKLLVAVVLCLIFMSVEVAGGIKANSLAILTDAAHLLSDVAAFAISLFSLWAAGWEANPRQSYGFFRIEILGALVSIQLIWLLAGILVYEAIVRIIDGSREVDGFLMFLVAAFGLVVNIIMAVLLGHDHGHGHDDHDHGLGHGHSHSHGHGFKVSTHHDHDHDDHHHETNPKDEHHHHHSCEDDKHHHAHDEAAEPFLGGSKDKLEKKRRWNINVQGAYLHVLGDSIQSIGVMIGGAIIWYNHEWQIVDLICTLIFSVIVLGTTINMLRSILEVLMESTPREIDATKLERGLLDMDEVVAVHELHIWAITVGKILLACHVKIRPEANADMVLDKVIDYIRRVYNISHVTIQIER 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1269 422 Pfam Cation efflux family 71 344 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Dere11g1269 422 NCBIfam cation diffusion facilitator family transporter 68 422 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Dere11g1269 422 MobiDBLite consensus disorder prediction 203 258 - -
Dere11g1269 422 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 350 421 IPR036837 -
Dere11g1269 422 SUPERFAMILY Cation efflux protein transmembrane domain-like 65 345 IPR027469 -
Dere11g1269 422 MobiDBLite consensus disorder prediction 220 258 - -
Dere11g1269 422 Gene3D Cation efflux protein transmembrane domain 67 343 IPR027469 -
Dere11g1269 422 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 19 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1269 Dere-ChrDere11 24060009 24063121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1269 14 422 Inorganic Solute Cotransporters AT2G46800 69.830 0.0 518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere11g1269 11 24060009 24063121 Dere11g1269 11 24060009 24063121 ECH