Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1264 ATGGCAGCTAAGGCTCCCTGCTTCACTCCATCTTCTTTCGCAGCACTCAGAGGCAAACCCCAATTCGCACCTTCAGCGAAACGGTTCGTTTCATGTTCGGCGTCTTTACCTTCTTCGGTTCATCTGTTATCCCTCGGCGCTATCTTCTATCCGCAGCCTATCACTTCGGAGCCTTCGTCTTGTTCTTCTTTATTGAAGGTGCAAAGCAGGAAAGCTAGGGTTTGCACTTCTTTGACGGTGGTGAGTGAAGAAGCAGTGCTTGCAGAAGAGATTAACGGACAAAAATATGTGGGCGCGGAAAACGATGACGTTTCCGGCGAGAATGAGCCCAAGAAAGTGGGAAGACCGTGTGAAGTATATGTGTGTAACCTCCCAAGGAGCTGTGACTCAACCCTACTTCATGATATGTTCAAGCCTTATGGAACTGTTCTATCTGCGGAGGTTAGTCGGAATGATGAGACTGGTGAAAGTAGAGGATGTGGTTATGTCACAATGGGATCTTTAAACTCAGCAAAAAATGCAGTTGCTGCATTGGATGGATCAGACATTGCCGGGCGTGAAATGCGGGTTAGATTTTCAGTTGAGATGAATCCTGGAAGGAGAAATGCTGAGACAATGAACTCGTCACCCCAGAGAGTTGTATTCTTTGAAACTTCTCATAAGTTGTATGTTGGCAATCTTGCTAGGGCTGTTAAACCCGAAGAGTTATGGAATCATTTTAGCAGATTTGGGACTGTGGTTAGTGTTAGAATATTGCACGATCACAAAGAAGGGAGCAGCCGTATCTATGCGTTTCTCTCTTTCCTTGCAAAGTCAGAACGGGATGCAGCAATGTCACTTAATGGAACAGAACTACGTGGCCGCATACTAGTAGTGAGAGAAGGCATAGAGAGGACTAGGCCTTGA 906 0.4614 MAAKAPCFTPSSFAALRGKPQFAPSAKRFVSCSASLPSSVHLLSLGAIFYPQPITSEPSSCSSLLKVQSRKARVCTSLTVVSEEAVLAEEINGQKYVGAENDDVSGENEPKKVGRPCEVYVCNLPRSCDSTLLHDMFKPYGTVLSAEVSRNDETGESRGCGYVTMGSLNSAKNAVAALDGSDIAGREMRVRFSVEMNPGRRNAETMNSSPQRVVFFETSHKLYVGNLARAVKPEELWNHFSRFGTVVSVRILHDHKEGSSRIYAFLSFLAKSERDAAMSLNGTELRGRILVVREGIERTRP 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1264 301 PANTHER OS02G0815200 PROTEIN 55 293 - -
Dere11g1264 301 Gene3D - 205 301 IPR012677 -
Dere11g1264 301 SMART rrm1_1 221 293 IPR000504 GO:0003723
Dere11g1264 301 SMART rrm1_1 118 191 IPR000504 GO:0003723
Dere11g1264 301 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 119 189 IPR000504 GO:0003723
Dere11g1264 301 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 222 289 IPR000504 GO:0003723
Dere11g1264 301 Gene3D - 81 204 IPR012677 -
Dere11g1264 301 SUPERFAMILY RNA-binding domain, RBD 216 298 IPR035979 GO:0003676
Dere11g1264 301 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 117 195 IPR000504 GO:0003723
Dere11g1264 301 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 220 297 IPR000504 GO:0003723
Dere11g1264 301 SUPERFAMILY RNA-binding domain, RBD 110 203 IPR035979 GO:0003676
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1264 119 298 Eukaryotic Initiation Factors Gene Family AT3G16380 34.066 5.31e-17 79.3