Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1252 ATGCTGAGTCCCGGAACAAATTTTCTTGCCCCATCTTTTGACACTTCCTTGAACAACTTTCTTACAAACAAGGCTAGTGTCAGTCACATTTGCAGCCGCGCGGCAAATTGTTGGGAACCAGTCTTCTCCGATCTCATTTCCTTGAGTGTAAAAATGTCGTTTGGAGAGCTTGCTTGCGGTTACGCGGTCATGATCCTTTATGATGATAACATTCCTGTCACTGCCGAGAAGATCTCGACCTTGGTGAAAGCGGCAAATGTCGATATTGAATCTTACTGGCCAAGCTTATTTGCTAAACTTGCTGAGAAACGAAATATTGAGGATTTGATATTGAATGCTGGGGGTGGTGGGGCTACGGTTGCTGTTGCAGCCCCAGCTGCCGCTGCAGCTGGTGGCGGTGGTGCTGCCGCTCCTCCTCCTGCTGAGGAGGAGAAGAAGAAGGAAGAACCCCAGGAAGAGAGTGATGATGACATGGGATTCAGCTTGTTCGATTAG 495 0.4848 MLSPGTNFLAPSFDTSLNNFLTNKASVSHICSRAANCWEPVFSDLISLSVKMSFGELACGYAVMILYDDNIPVTAEKISTLVKAANVDIESYWPSLFAKLAEKRNIEDLILNAGGGGATVAVAAPAAAAAGGGGAAAPPPAEEEKKKEEPQEESDDDMGFSLFD 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1252 164 Gene3D - 52 114 IPR038716 -
Dere11g1252 164 FunFam 60S acidic ribosomal protein P1 52 114 - -
Dere11g1252 164 Hamap 50S ribosomal protein L12 [rpl12]. 57 164 IPR027534 GO:0003735|GO:0005840|GO:0006414
Dere11g1252 164 CDD Ribosomal_P1 56 163 - -
Dere11g1252 164 Pfam 60s Acidic ribosomal protein 73 163 - -
Dere11g1252 164 MobiDBLite consensus disorder prediction 130 164 - -
Dere11g1252 164 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1 52 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1252 Dere-ChrDere11 23842333 23843474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1252 52 164 Cytoplasmic Ribosomal Protein Gene Family AT5G24510 55.752 3.23e-38 125