Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1247 ATGTTGGTCAAAACATTTCATTCACCAGCCATTGCTCTGTCTCATCTTATTCCCTCCAATGAATCTTTTAATTGCGAGTGTCTTGCTTTTAATTTCTCGGAGAATAAAGCTGGCAGCGTGTTACGGTACGATTTGATAATGGGGAAGAAGAAGGGAGGTAGCTCATGGTTGACTGCTGTGAAAAGGGCTTTCAGATCTCCAACCAAAGAACAAGACGAAGACAAGAAGAGAGACAAACGAAGATGGATCTTCAGAAAACCAGTAATGAGCCACGAAACACCAAGTTCCCAACAAACCCCGATAAAGCAGAAGCCTGATGCGGCTGAGTCGGCGACAGATCAAAAGCACGCGCTTGCGGTGGCGGTCGCTGCCGCCGAGGCCGCCATGGCCACCGCTCAGGCGGCCGTGGAAGTGGCCAGATTAAACAGACCACCGAATCATACTAAGGAGCACTATGCTGCTATTGTGATTCAAACTACTTTTAGAGGATATTTAGCAAGAAGGGCTCTTCGAGCGCTGAAGGGGCTGGTGAAATTACAAGCATTGGTTAGGGGTCACAATGTTCGGAAGCAAGCGAAGATGACGCTTCGGTGCATGCAGGCTTTGGTTCGAGTCCAAGCTCGCGTGGTTGACCAGCGCGTGAGGCTGTCACACGATGGAAGCAGTAGAAAATCCACGTTCAGTGACACCAATAGCCTCTTGGAATCGCGGTATCTTCAAGACATTTCAGATAGGAAATCAATGTCAAGAGAAGGAAGCAGTATTGCAGACGATTGGGATGAACGCCCACACACAGTTGAAGAAATTAAAGCTATGTTGAAGCAGAGGAAAGAGGCAGCCATGAAGCGAGACAAGTCCTTGTCTCAAGCTTTCTCTCAACAGGTTTGGAGAACAGGTAGAAGGCCATCAATTGGGAATGAAGAGGAGCTAGAAGAAAGACCGATATGGCTTGACCGGTGGATGGCGGCGAAGCCATGGGAGACCAGGGGAAGAGCATCAATTGATCAGAGAGACACCATCAAGACAGTAGAAATGGACTCTTCTCATCCTTACTCATCATATTTAGGATCTAACTACAGGAAATCCCATCCCAATTATCAATATAACCCACACCAGCACCAACCACAGAGACACTCAGTGGCTTCCCCACTCCACAAAACCTTCCAAAATGGATCATCTCTTCACCATTCCCCTGCAACCCCATCTCCTGCAAAATCAAGGCCAGTCCATGTCCGGTCTGCAAGCCCTCGCTGTGGAAGGGAAGATAGAAGCTTCCATACTTCTCAAACACCAACCTTAAGGTCAAACTATCATTACACTGGAAACTTGTACCAACATGGAAGGGTTGGAACAAGCAATCATGGGGCTGGGTCATTGCCTAATTACATGGCGGCAACCGAGTCTACAAAGGCCCGGATTCGCTCGCAGAGCGCACCAAGGCAGAGGCCTTCAACTTCAGAGAGGGACAGAGTTGGGTCAGCAAAGAAGAGGCTTTCTTTCCCTGCTCCTCCTCCAGATGCTTATGTTTATGGCAGTTATGGTTGTTATGGTAGTTATGGGCATAGTTTGAGGAGTCCAAGCTTCAAGAGTGTGTGTGGATCACAGTACGGGCTGGATCAACAATCCATCTATTCTTCTTGCTGCACTGATAGCTTTGCTGCTGCTGGTGAGATGTCTCCTTCTTCAACTGGTGACCTTAGAAGGTAG 1707 0.4821 MLVKTFHSPAIALSHLIPSNESFNCECLAFNFSENKAGSVLRYDLIMGKKKGGSSWLTAVKRAFRSPTKEQDEDKKRDKRRWIFRKPVMSHETPSSQQTPIKQKPDAAESATDQKHALAVAVAAAEAAMATAQAAVEVARLNRPPNHTKEHYAAIVIQTTFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVVDQRVRLSHDGSSRKSTFSDTNSLLESRYLQDISDRKSMSREGSSIADDWDERPHTVEEIKAMLKQRKEAAMKRDKSLSQAFSQQVWRTGRRPSIGNEEELEERPIWLDRWMAAKPWETRGRASIDQRDTIKTVEMDSSHPYSSYLGSNYRKSHPNYQYNPHQHQPQRHSVASPLHKTFQNGSSLHHSPATPSPAKSRPVHVRSASPRCGREDRSFHTSQTPTLRSNYHYTGNLYQHGRVGTSNHGAGSLPNYMAATESTKARIRSQSAPRQRPSTSERDRVGSAKKRLSFPAPPPDAYVYGSYGCYGSYGHSLRSPSFKSVCGSQYGLDQQSIYSSCCTDSFAAAGEMSPSSTGDLRR 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1247 568 Pfam IQ calmodulin-binding motif 153 171 IPR000048 GO:0005515
Dere11g1247 568 Pfam IQ calmodulin-binding motif 177 193 IPR000048 GO:0005515
Dere11g1247 568 Gene3D - 148 209 - -
Dere11g1247 568 ProSiteProfiles IQ motif profile. 150 178 IPR000048 GO:0005515
Dere11g1247 568 PANTHER IQ-DOMAIN 5-RELATED 47 502 - -
Dere11g1247 568 Pfam Protein of unknown function (DUF4005) 415 511 IPR025064 -
Dere11g1247 568 FunFam IQ-domain 11 149 200 - -
Dere11g1247 568 MobiDBLite consensus disorder prediction 65 80 - -
Dere11g1247 568 MobiDBLite consensus disorder prediction 65 112 - -
Dere11g1247 568 MobiDBLite consensus disorder prediction 470 499 - -
Dere11g1247 568 SMART iq_5 149 171 IPR000048 GO:0005515
Dere11g1247 568 SMART iq_5 172 193 IPR000048 GO:0005515
Dere11g1247 568 ProSiteProfiles IQ motif profile. 174 201 IPR000048 GO:0005515
Dere11g1247 568 MobiDBLite consensus disorder prediction 90 105 - -
Dere11g1247 568 MobiDBLite consensus disorder prediction 345 400 - -
Dere11g1247 568 MobiDBLite consensus disorder prediction 340 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1247 Dere-ChrDere11 23760068 23762637 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1247 56 568 IQD Protein Family AT4G00820 54.446 4.56e-173 499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere11g1247 11 23760068 23762637 Dere11g1247 11 23760068 23762637 ECH