Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1232 ATGGGTAGCGGACAGAAGAGTCTGAAGAGCTTCCATAGCCATGGGAAGAAGCAAGAGTTCAGAGACGTACCAAAAGGCTGCTTGGCGATCAAGGTGGGTCAAGGAGAAGACAAATTACAGAGATTTGTTGTGCCTGTGATATACTTCAACCACCCTCTGTTCTTGCAGCTATTGAAGGAGGCAGAGGAAGAATTTGGGTTCGATCAGAAAGGAACCATAACGATTCCCTGCCACGTGGAGGAGTTTAGGTACGTCCAAGGAATGATCGATGGGGAAAAGTCCCTTCATCACCACCATCATCACCATACTGGGTGCTTTGGATTCTGA 327 0.4771 MGSGQKSLKSFHSHGKKQEFRDVPKGCLAIKVGQGEDKLQRFVVPVIYFNHPLFLQLLKEAEEEFGFDQKGTITIPCHVEEFRYVQGMIDGEKSLHHHHHHHTGCFGF 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1232 108 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 14 84 IPR003676 GO:0009733
Dere11g1232 108 Pfam Auxin responsive protein 12 88 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1232 Dere-ChrDere11 23515921 23516247 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1232 22 100 Calmodulin-binding Proteins AT5G20810 51.250 4.99e-21 81.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere11g1232 11 23515921 23516247 Dere11g1232 11 23515921 23516247 ECH