Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1230 ATGGTGAGAAGTGGAGAGAAAAGCTTTAGACTCAGAGAACTTCCCATTATTGCATATAATCATCATCAGCATCACGATCATGAGCAGAGAAAAGCAGTGATGACCAGAGATGTTCCAAAAGGGTGTTTGGCAATCAAGGTGGGCACAAATGGAGGAGAGCAAGAGAGAATAGTGGTGCCTGTGAGATATTTCAATCACCCACTGTTTGCTCAGCTGCTGAAGGAGGCTGAGGAAGAGTATGGGTTTGCTCAAGAAGGTGCCATTACTATCCCTTGTCAACTGGAGCAGTTTAGGTACGTTCAAGGCATAATTGACAGGGAAAACTCCATCCACCACCATCATCACCATCTTGTTGGCTGCTTTAGGCCTTTTCTTGTTGAGGATGAGGATGACTACTATGGTAACGTCCAAATCTATGGCGAGAGAGAAAGGAATTGA 438 0.4475 MVRSGEKSFRLRELPIIAYNHHQHHDHEQRKAVMTRDVPKGCLAIKVGTNGGEQERIVVPVRYFNHPLFAQLLKEAEEEYGFAQEGAITIPCQLEQFRYVQGIIDRENSIHHHHHHLVGCFRPFLVEDEDDYYGNVQIYGERERN 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1230 145 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 30 99 IPR003676 GO:0009733
Dere11g1230 145 Pfam Auxin responsive protein 30 100 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1230 Dere-ChrDere11 23499266 23500364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1230 37 114 Calmodulin-binding Proteins AT5G20810 47.436 3.32e-18 75.1