Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1226 ATGTCTACCACCACGCACATTGACACCCTCTGGTTTTTTCTCTTACCCTCCCAATGCATCTCCCAAAACCTCCCATGGTCCCTCTTCCTCCTTGCTTCCCTCTTCCTCGTCATCACCATCTTCCACTGGTCTCACCCCGGCGGTACCGCTTGGGGCAAGTACTACTCCTGGACAAGAACCACCACCACAATGATTCCTGGCCCCAAAGGCTTGCCTCTGTTCGGCAGCATCAACCTCATGTCCTCCCCTCTTGCCCACCGCCTCATCAGCGCCGCCGCCTCCTCATGCAACGCCCGACGCCTCATGGCCTACAGTCTTGGCGACACGCGGGTGATCGTCACGTGCCACCCCGACGTTGCCAAGGACATCTTGAGCAGCTCCGTGTTCGCTGATCGGCCGGTGAAGGAATCCGCTTACAGCTTGATGTTTAACAGAGCAATCGGGTTCGCTCCTTATGGAGTGTACTGGCGTACCCTGAGGAGAATCGCAGCCAATCATCTCTTCTCTCCCAAGCAAATTAAAGCCTCCGAGGGGTACAGGTCCGAAATCGTTTCCCAAATGGTGCGAGTGTTTGGAAACGAGAGTAGCTATAACGGGTTCGAGGTTCGGCGGGTGCTGAAAAAGGCGTCGCTCAGTCACATGATGTGCTCCGTGTTTGGGAAGCGGTATAGGTTGGAAGAGTCAAACGGGGAAATGGAGGAGCTGAGTGGGTTAGTGGAGGAAGGGTACGACTTGTTGGGTGCCCTTAATTGGGGGGACCATGTCCCCTGGCTTTCAGATTTGGACGCCCAGAGAATCCGGTTCAGGTGCTCCAAACTGGTCCCTAAAGTGAATCGGTTCGTTGGTAAAATTATCTCCGACCATCGAGCGGAAAAGGACAGAACCGACCGGGATTTCGTTGACGTCTTGCTCTCCCTCCATGGACCCGATGAACTACCCGACTCCGACATGATCGCCGTACTCTGGGAAATGATATTTAGGGGGACTGACACGGTGGCGATTTTGATTGAGTGGATATTGGCGAGGATGGTGCTTCATCCTAACGTGCAGTCAAAGGTTCAAGCGGAGCTTCACGAAGTGGTGGGGAGGTCGCGCGCCGTCACGGAGGCGGATGTGGCGGCGATGGTGTACTTGCCGGCGGTGGTGAAGGAGGTGCTGAGGCTGCACCCGCCGGGCCCACTGCTCTCATGGGCTCGCTTGGCCATCAGCGATACGACCATTGATGGGTACCATGTGCCGAAGGGTACCACGGCCATGGTAAATATGTGGGCAATAGCTCGGGACCCAGATGTGTGGAAGGAGCCATTGAAGTTCATGCCTGAGAGGTTCGTCACTGAAGGAGAAGGACACGTGGAATTCTCGATCCTCGGGTCGGATCTACGGCTGGCACCCTTCGGGTCGGGCAGGAGAATATGCCCCGGTAAGACATTGGGCTTAGCGACGGTGACCTTCTGGGTGGCGTCGCTTCTGCATGAGTTTGAATGGCGACCGTCCGGTCAATATGGCGTTAATCTCTCGGAAGTTTTGAGGATGTCCAGTGAAATGGCTAGTCCTCTCAGGGTTAAAGTGTGTCCCAAGCGTGGTGAATTAAGCCTGTAG 1599 0.556 MSTTTHIDTLWFFLLPSQCISQNLPWSLFLLASLFLVITIFHWSHPGGTAWGKYYSWTRTTTTMIPGPKGLPLFGSINLMSSPLAHRLISAAASSCNARRLMAYSLGDTRVIVTCHPDVAKDILSSSVFADRPVKESAYSLMFNRAIGFAPYGVYWRTLRRIAANHLFSPKQIKASEGYRSEIVSQMVRVFGNESSYNGFEVRRVLKKASLSHMMCSVFGKRYRLEESNGEMEELSGLVEEGYDLLGALNWGDHVPWLSDLDAQRIRFRCSKLVPKVNRFVGKIISDHRAEKDRTDRDFVDVLLSLHGPDELPDSDMIAVLWEMIFRGTDTVAILIEWILARMVLHPNVQSKVQAELHEVVGRSRAVTEADVAAMVYLPAVVKEVLRLHPPGPLLSWARLAISDTTIDGYHVPKGTTAMVNMWAIARDPDVWKEPLKFMPERFVTEGEGHVEFSILGSDLRLAPFGSGRRICPGKTLGLATVTFWVASLLHEFEWRPSGQYGVNLSEVLRMSSEMASPLRVKVCPKRGELSL 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1226 532 PANTHER CYTOCHROME P450 78A7-RELATED 5 526 - -
Dere11g1226 532 SUPERFAMILY Cytochrome P450 65 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g1226 532 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g1226 532 PRINTS E-class P450 group I signature 379 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g1226 532 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g1226 532 PRINTS E-class P450 group I signature 472 495 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g1226 532 PRINTS E-class P450 group I signature 421 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g1226 532 PRINTS E-class P450 group I signature 462 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g1226 532 PRINTS E-class P450 group I signature 209 227 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g1226 532 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g1226 532 PRINTS P450 superfamily signature 472 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g1226 532 PRINTS P450 superfamily signature 463 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g1226 532 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g1226 532 FunFam Cytochrome P450 78A5 57 526 - -
Dere11g1226 532 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 465 474 IPR017972 GO:0005506|GO:0016705
Dere11g1226 532 CDD CYP78 97 519 - -
Dere11g1226 532 Gene3D Cytochrome P450 55 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g1226 532 Pfam Cytochrome P450 66 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1226 Dere-ChrDere11 23448341 23450041 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1226 41 527 Cytochrome P450 AT3G61880 70.961 0.0 695