Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1217 ATGTTGAGAATGAATTCTGACGCTGAATATAATGGACATAGGACGAGGGTGCCTCCCGAATTGGAGGAAGATTTTGTAGAGAAAGATCCTACTGGCTGCTATCTTCGGTACAATGAAATCTTGGGCAGGGGTGCTTTCAAGACTGTTTACAGGGGGTTTGATGAAATTAATGGAATAGAAGTTGCTTGGAACCAAATTAGGATTGATGATCACTTGCAATCATCAGAAGATTTATCAAAATTGCGTTCTGAAGTTCGTCTTTTGGAAAATTTGAAACATGAGAATATCATCAAGTTCTACTATTCTTGGATTGATGTCCAGAAGAAATCTGTTAACATGATAACTGAGCTCTTCACATCTGGAAATTTGAGGCAATATCGTAGGAAGCATAAACATGTTGACATGAAGGCCATAAGGAATTGGGCTAGACAGATTCTTCGAGGCTTAGTATATTTACATGGTACTCCTGAGTTTATGGCTCCAGAGTTATATGAAGAGGAGTACAATGAACTTGTCGACATCTATTCTTTTGGGATGTGCATATTAGAGATGGTTACTCTAGAGTATCCTTATATTGAATGCAAAAATCCGGCTCAAATCTTTAAGAAAGTTACCTCTGGCATCAAGCCTGCTTCCCTTAGTAAGGTGAAAGACTCTCACATAAAGGCATTTATCGAGAAATGCATTGTTCCAGCCTCTAAGAGATCGTCTGCAGAGGAGCTTCTTAAAGATCCATTTCTCCAAGTTGAAAGTCCAAGGGGTCCAATTCGTGATCCTCTACTATTACCTAAAACTCCAAAAGCTATAGATATGTCTAAATCTGGCCCTCTATCTATGGACATAGATGCTGAATATAAACATATTTCCATGAGTACAAATCGCGAAAGCAACTACAGATGTCCACATTGTCCTGAACTAGAATTCCAGAAGACAAATAAGAATCATGAATTCAGGTTAAAAGGGAAAAAAATTGATGATACTTCAGTATCATTGACCTTGCGAATTGCTGATTTAGATGGTTCGGCAAGGTATGTACATTTCCCCTTTTACCTTAATTCAGATACCGCAGTCTCTATAGCCTCAGAGATGGTTGAACAAGAAGAGTTGGCGCATCATGATGTGGCCTTCATAGCTGAACTTATTGATTACTTGATAGTGAAACTTATGCCTGGGTGGAAGCCATCATCTGATTATTCCTCAAGTGGAGGAGTAAGTCTCATTGGTGGGTCTCCAACACTCAGAGATGGCCAAACCATAACGGCATGCCCATGGGATTCTGTTCTAGCTAGTGTTCCATCTGGAAGGGGTACTAAGCAAAAGGGTTTGTGTGACAATGCTGATAATGCAAGTTTTTGGGCTTATTTTTCTTCTTCTCCTAGTTTGACTAACTTGGAATATAAATATGCATCAGGATCTACATCTTCTGAGATAGTCGTGGAAGATGAGTCCATAAAAGGCTACAAGTTTCTTGATTTGAATTTTGGTGGAAGCTCTAAAGGCTTAAATCAGTCCTCAAAACTGGAGTTAGGGGATACATGTTTTGAAGACGGTAAATTGCAGACAATTTGTAATAATAGTAACGCTGAAGAAGGCATTGTCATAAATGAATTCACAAAGAACTCAGAGTCGGCAACCCCAGTTCTTAGTGCAACATCTGATATTATGAGCATGACAAGTAATTGTTCTTCGCTGTCCTTGGCAGAAAAGTACATTGATGATGAGCTACAGCTGGAACTTGATACAATTGAAAAACGATATCAACAAGAGATTGAAGAACTTTGTAGAAGGAAATTGAAAGCAATAGAAGTCACCAAGAAAAGATGGATTGCCAAGAAAAATCTGGCTATTTGTTGA 1854 0.3878 MLRMNSDAEYNGHRTRVPPELEEDFVEKDPTGCYLRYNEILGRGAFKTVYRGFDEINGIEVAWNQIRIDDHLQSSEDLSKLRSEVRLLENLKHENIIKFYYSWIDVQKKSVNMITELFTSGNLRQYRRKHKHVDMKAIRNWARQILRGLVYLHGTPEFMAPELYEEEYNELVDIYSFGMCILEMVTLEYPYIECKNPAQIFKKVTSGIKPASLSKVKDSHIKAFIEKCIVPASKRSSAEELLKDPFLQVESPRGPIRDPLLLPKTPKAIDMSKSGPLSMDIDAEYKHISMSTNRESNYRCPHCPELEFQKTNKNHEFRLKGKKIDDTSVSLTLRIADLDGSARYVHFPFYLNSDTAVSIASEMVEQEELAHHDVAFIAELIDYLIVKLMPGWKPSSDYSSSGGVSLIGGSPTLRDGQTITACPWDSVLASVPSGRGTKQKGLCDNADNASFWAYFSSSPSLTNLEYKYASGSTSSEIVVEDESIKGYKFLDLNFGGSSKGLNQSSKLELGDTCFEDGKLQTICNNSNAEEGIVINEFTKNSESATPVLSATSDIMSMTSNCSSLSLAEKYIDDELQLELDTIEKRYQQEIEELCRRKLKAIEVTKKRWIAKKNLAIC 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1217 617 Coils Coil 572 592 - -
Dere11g1217 617 FunFam Probable serine/threonine-protein kinase WNK1 20 116 - -
Dere11g1217 617 Gene3D Transferase(Phosphotransferase) domain 1 153 252 - -
Dere11g1217 617 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 154 605 - -
Dere11g1217 617 ProSiteProfiles Protein kinase domain profile. 35 247 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g1217 617 Pfam Protein kinase domain 38 153 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g1217 617 Pfam Protein kinase domain 154 247 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g1217 617 Gene3D - 327 395 - -
Dere11g1217 617 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 331 385 IPR024678 GO:0004674|GO:0005524
Dere11g1217 617 SUPERFAMILY Protein kinase-like (PK-like) 32 254 IPR011009 -
Dere11g1217 617 Gene3D Phosphorylase Kinase; domain 1 19 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1217 Dere-ChrDere11 23319465 23322537 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1217 527 616 MAP Kinase Kinase Kinase AT5G41990 32.222 4.08e-06 47.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Dere11g1217 Pkinase 3.8e-19 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere11g1217 11 23319465 23322537 Dere11g1217 11 23319465 23322537 ECH