Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1194 ATGGAGCCGCCACCACCCTACACTAACGACGATGACCTAACAGCCACCACAACCACCGCCGTATCCTCCACCGCCGCTGAGACTGCCGAAAAATCCGATAGCTCACGAGCCGGCGGCACACGCCACCCCGTCTACCGGGGTGTCCGGAAGCGGCGGTGGGGCAAATGGGTGTCCGAAATCCGGGAGCCGCGAAAGAAGTCGCGCATATGGCTCGGGTCGTTCCCGGTGCCGGAGATGGCTGCGAAGGCGTATGACGTGGCGGCGTACTGCCTGAAAGGCCGGAAAGCGCAGCTCAATTTTCCCGACGAGGTCGAGCACTTGCCGTTGCCGTCCACCTGTGCAGCCAGAGATATCCAGGCGGCGGCAGCGAAGGCGGCTAATGCAATGAAAGCCAAGGCGAAGAAGAGTAGCATTATTTCCGACGGCGACGGCGATGGTGACAACGACAGCGGGGGCGACGATTTTTGGGGCGAGATTGAATTGCCGGAGCTGATGAACAGCGAGTATTATTGGAACTCTCCGAGTGGATCATCATGGACTTCCTCCGGCGACGTCACAGCGTGGCCGGAGATGGAGCTTCCGCCGCAGCAGCAACCATTCATGGCGTGTCTATAA 615 0.6033 MEPPPPYTNDDDLTATTTTAVSSTAAETAEKSDSSRAGGTRHPVYRGVRKRRWGKWVSEIREPRKKSRIWLGSFPVPEMAAKAYDVAAYCLKGRKAQLNFPDEVEHLPLPSTCAARDIQAAAAKAANAMKAKAKKSSIISDGDGDGDNDSGGDDFWGEIELPELMNSEYYWNSPSGSSWTSSGDVTAWPEMELPPQQQPFMACL 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1194 204 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 25 168 - -
Dere11g1194 204 SMART rav1_2 44 107 IPR001471 GO:0003700|GO:0006355
Dere11g1194 204 CDD AP2 45 102 IPR001471 GO:0003700|GO:0006355
Dere11g1194 204 Gene3D AP2/ERF domain 44 102 IPR036955 GO:0003700|GO:0006355
Dere11g1194 204 MobiDBLite consensus disorder prediction 133 156 - -
Dere11g1194 204 FunFam Ethylene-responsive transcription factor 2 43 102 - -
Dere11g1194 204 SUPERFAMILY DNA-binding domain 44 103 IPR016177 GO:0003677
Dere11g1194 204 ProSiteProfiles AP2/ERF domain profile. 44 101 IPR001471 GO:0003700|GO:0006355
Dere11g1194 204 Pfam AP2 domain 43 93 IPR001471 GO:0003700|GO:0006355
Dere11g1194 204 MobiDBLite consensus disorder prediction 10 33 - -
Dere11g1194 204 MobiDBLite consensus disorder prediction 1 45 - -
Dere11g1194 204 PRINTS Ethylene responsive element binding protein signature 45 56 IPR001471 GO:0003700|GO:0006355
Dere11g1194 204 PRINTS Ethylene responsive element binding protein signature 83 103 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1194 Dere-ChrDere11 22992741 22993355 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1194 5 204 AP2-EREBP Transcription Factor Family AT1G01250 58.049 1.83e-63 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dere11g1194 AP2 2.1e-13 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere11g1194 11 22992741 22993355 Dere11g1194 11 22992741 22993355 ECH