Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1191 ATGGAATCCGAAACGCGACGGAAAATCGAGGAAACGGTGATGGATATACTAAAGAGTTGTGACATTGAAGAAACGACGGAGTTCACAATCCGAGTCGCGGCCTCGGAGCGGCTCGGAATCGATCTTTCTGGCTTCGAGCAAAGGCAGTTTGTGAGAAGCGTGGTGGAGTCTTATCTGCTTGCTATTGCGGAGGAAGGAGATGGAAGGGACAGAGCGTCTGAACCGAGTGCTCCAGAAGCGAATAGAGAGGCGGTGCAGGAAGAGCTGGAGGAGAAGCCGAAGGTTAAGGAGGACTCGGACCGCATCATTTGCCAGCTATCGACCAGGAGGAATGTGGTGCTTCAAGATTTCAGGGGGAAAAGGTTGGTCTCAATTAGGGAATTTTATCAAAAGGATGGAAAACAGCATCCTAGTACTAAAGGGATAAGTTTGTCAACTGAACAGTGGTCTGCCTTCAAGAAAAGTGTCCCTGCTATAGAGGAAGCTATTACAAAGATGGAAGCAAAGATGAGATCTGAGATTCATGTTAAGCAAAATGGAGATGTGCCGTACCCAGTTCTTGATGCTGCCCCTCCTGAACCTGTCCCTTTTGATATCAGCCGTTTTGATGGGAAAAATTACCATTTCTGGGTTCAACAGATGGAGTCACTCTTAAAGCAACTAAAGATTGCATATGTGCTCACTGAACCATGCCCCAATACTGAACCAGGACCAGATGCAAGCACCGAAGAAATTGCTGAAGCCAGAGCAGCAGAAAAGAGGCATGCTAGAGATAGAAGAATAGAAGAAAATGGGCCAACTACACCTGCAGTTGCAGATGTTAACATGGTTGGTGTCTCTGAGTAG 846 0.4704 MESETRRKIEETVMDILKSCDIEETTEFTIRVAASERLGIDLSGFEQRQFVRSVVESYLLAIAEEGDGRDRASEPSAPEANREAVQEELEEKPKVKEDSDRIICQLSTRRNVVLQDFRGKRLVSIREFYQKDGKQHPSTKGISLSTEQWSAFKKSVPAIEEAITKMEAKMRSEIHVKQNGDVPYPVLDAAPPEPVPFDISRFDGKNYHFWVQQMESLLKQLKIAYVLTEPCPNTEPGPDASTEEIAEARAAEKRHARDRRIEENGPTTPAVADVNMVGVSE 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1191 281 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 3 168 IPR045125 GO:0003713|GO:0060261
Dere11g1191 281 SUPERFAMILY ssDNA-binding transcriptional regulator domain 103 165 IPR009044 GO:0003677|GO:0006355
Dere11g1191 281 Pfam Transcriptional Coactivator p15 (PC4) 104 154 IPR003173 GO:0003677|GO:0006355
Dere11g1191 281 MobiDBLite consensus disorder prediction 66 93 - -
Dere11g1191 281 Gene3D Transcriptional Coactivator Pc4; Chain A 94 171 IPR009044 GO:0003677|GO:0006355
Dere11g1191 281 FunFam RNA polymerase II transcriptional coactivator KELP 95 167 - -
Dere11g1191 281 ProSiteProfiles DEK C-terminal (DEK-C) domain profile. 3 60 IPR014876 -
Dere11g1191 281 MobiDBLite consensus disorder prediction 251 281 - -
Dere11g1191 281 Pfam DEK C terminal domain 5 59 IPR014876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1191 Dere-ChrDere11 22902331 22906825 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Dere11g1191 DEK_C 1.5e-10 No_clan