Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dere11g1182 | ATGATAGTTAAGCGGACTATGAAAATTGAAATGCCGAACTTGAAGCGATGTAAGTTAGAGGAGCTCGATGAGGAGGACTTTGTATGTGCGGCGAATCCCAAGAAGCGGAGGGCAAATGGGTTCCATTTTCCTGGTATACCAGGTGAGGCTAAAGATATGAGCACTGGTTCTGAGTCTTGGTGCAGTAAAGGATCGCATTGCGGTGGTGAGTTACAGTCAATTTCAAATTCTATGAAATTGAATGATAGAACAGTACTAAACCGGGCCTCAGAAAGGCATCGGCCTCCATTATTGCAGTCATCGCGAGGTCGCTCTCAGATGCTTCCATTGAGGTTCAGAGATTCGGTCCTTCATACGTGGAAGAATAAAAGAATCAAACTGGAGGACACGGAGTCCAGCTTTATTGAAGATAGTATTTTAGGGGAAGATGGGTCGAAGTTTGGTGGAATGGGATATGTAAAACAGGGACTGAGAGTTAACTGTGGTTTCAAAAGTTCAAAGTGTTTTTCGTATCCTGAAATGGAGGAGGAAGGAGACTTGGGTGCCTTAGATTCGAGTGATTTTGACGTCGGGGGGCATGAGAATTCGTTTAGTACCAGTTCAACGACAATTAACGAGAGTCGTTCAGCATTAGTTAAAATCGAGAGTTACGCGTCCGGATTTAATCCTGTAGGTGTAGTCCCAAAACCTAATGGGAATGCTGAAAAGAGGACAGACATCTACAAACTGGAGGATTTTGCTTCCGGCGATATAGTTTGGGCAAAATGTGGGAAGAGATATCCGGCTTGGCCTGCTATAGTGATTGATCCCATCTTGCAAGCTCCAAAATCGGTCCTGAGCTGTTGCGTTCCAGGTGCAATTTGCGTTATGTTTTTTGGGTATTCCAAAAATGGAAAGCAAAGGGACTATGCATGGGTGAGACAGGGAATGATATTCCCATTCATGGAATTCATGGACAGATTCCAGGGGCAGACCCGGCTGTACAAGAGCAAACCAAGTGAATTTCAGATGGCACTAGAGGAGGCTTTGTTGGCAGAAGATGGTATTCTGGACTCGCATTTGGCCGCAGATCAAATTAGTAAGAGTAACGTTAAAGCTCATCCCAGTGGATTTGTAGAGGTTACAGGTCCAAATAATGATCAGGAATACTGCCAGGACCAGGATGCAAGACTGTGTGCTGGCTGTGGTTTGATGTTACCTTGCAAAACCATGAAGAAGATTAAGGAATCTAGTCGTGTTCAACTTTATTGCAAACATTGCTCAAAGTTACGAAAATCCAAACAATATTGTGGCATTTGCAAAAAGATTTGGCACCATTCAGATGGTGGGAATTGGGTATGCTGTGATGGTTGTAATGTTTGGGTGCATGCTGAGTGTGATAAAATCTCCAGCAAACTTTTAAAGGATCTGGAACATATAGATTACTATTGCCCTGATTGCAAAGCAAAAGTCAAGAGTAAATTAGTAGCATCACAATCATACAAGTCAGAAATCAAATCAATTGAAAGTAACCAAAAACACTTAATACCTGAGAAGGTAACAGTGGTGTGCAATGGCATGGAAGGAATTTACATTTCAAGTCTTCATTTAGTTATGTGCAAGTGTGGTTCTTGTGGGTCAAGGAAGCAGACATTGAGTGAATGGGAACGGCATACAGGTTGCAGAGCCAAAAAATGGAAATTTAGTGTGAAAGTAAAAAGCACGATGCTACCACTAGAAAAATGGATTACTGAACACAATTCTCAAGCTGGAGTTTCTCTACGGTTAGATCAGCAGCAGGTACTTGCCTTTTTGCAAGAGAAGTATGAGCCAGTTTATGCAAAATGGACTACTGAGAGGTGTGCTATTTGTAGATGGGTTGAAGATTGGGATGATAACAAAATTATTATCTGTAACAGGTGCCAAATAGCAGTCCACCAAGAATGCTATGGGGTGAAGAATGCTAAGGATTTTACTTCTTGGGTTTGTAAAGTATGTGAAACTCCTGATGTTGATAGGGAGTGTTGCCTCTGTCCGGTAAAAGGTGGTGCTCTGAAGCCAACTGATGTTGAAATGCTTTGGGTTCATGTAACATGTGCTTGGTTCCGACCTGAAGTTATTTTCCAAAACCATGAGACAATGGAACCTGCCATTGGAATCCTTAAAATTCCTCCAAATTCCTTTTCAAAGATTTGCATTATCTGTAAACAAAGCCATGGCTCCTGCTTAAGTTGTTGCAAATGTGCTACTTATTTTCATGTGATGTGCGCATCAAGAGCAGGATATAGTATGGAATTGCATTCAATGGAGAAGAATGGGAATCAGATAACAAAGAAGCTAATATATTGTGCGGTTCATAGGGTCCCAAAACTTGATTCAGTACTGGTTGTGCATACACCCCTGGGGGTTTTCTCTCCTGGAACATCGTTTCAAAATCACAAGGGATGCTTCAGGGGATCAAGGCTGGTTTCCTTAAAGAATGTAGAACATCTTGAAGAAACTTCAACTGCTGAGACTTGTGAGGATGAGCCACTCTCTGCTGCTAGATGTCGTGTTTACAGAAGGCCTCTCAACAAGAAGGCTGATGTCTCAATACTTCACATATTGAAGGGACCAAGTCGTCATTCTTTGAGTGCAATAACTCAATTGAACAGCTATAAGGATGCTGAACATTCTAAAGTATTTACTTCACTCAAGGAACGTCTTCATCATTTGCAGAAAACTCAAAAGCATCAAGTTTGCTTTGGAAAATCAGGTATACATGGATGGGGCCTTTTTGCACATCGAGATATACAAGAAGGAGAGATGATTGCTGAGTATTGTGGTGAGCAGGTGAGGCGTAGCATTGCTGATTTAAGAGAAGCAAAGTACCGTTCAGAAGGCAAAGATTGTTATCTGTTCAAGATCAGCGAGGAAGTGGTAATTGATGCAACAGATAAGGGCAATATAGCACGCTTGATAAACCATTCTTGCATGCCGAACTGCTACGCAAGGATCATGAGTTTGGGTGATGAGGAGAGCCGAATTGTTCTTATTGCCAAGACCAATGTTTCTGCCGGTGAAGAACTAACGTATGATTACTTGTTCGATCCGGATGAGCGTGAAGAATTGAAAGTTCCCTGTCGTTGTAAAGCCTCAAACTGTAGGAAATTTATGAACTAG | 3141 | 0.4196 | MIVKRTMKIEMPNLKRCKLEELDEEDFVCAANPKKRRANGFHFPGIPGEAKDMSTGSESWCSKGSHCGGELQSISNSMKLNDRTVLNRASERHRPPLLQSSRGRSQMLPLRFRDSVLHTWKNKRIKLEDTESSFIEDSILGEDGSKFGGMGYVKQGLRVNCGFKSSKCFSYPEMEEEGDLGALDSSDFDVGGHENSFSTSSTTINESRSALVKIESYASGFNPVGVVPKPNGNAEKRTDIYKLEDFASGDIVWAKCGKRYPAWPAIVIDPILQAPKSVLSCCVPGAICVMFFGYSKNGKQRDYAWVRQGMIFPFMEFMDRFQGQTRLYKSKPSEFQMALEEALLAEDGILDSHLAADQISKSNVKAHPSGFVEVTGPNNDQEYCQDQDARLCAGCGLMLPCKTMKKIKESSRVQLYCKHCSKLRKSKQYCGICKKIWHHSDGGNWVCCDGCNVWVHAECDKISSKLLKDLEHIDYYCPDCKAKVKSKLVASQSYKSEIKSIESNQKHLIPEKVTVVCNGMEGIYISSLHLVMCKCGSCGSRKQTLSEWERHTGCRAKKWKFSVKVKSTMLPLEKWITEHNSQAGVSLRLDQQQVLAFLQEKYEPVYAKWTTERCAICRWVEDWDDNKIIICNRCQIAVHQECYGVKNAKDFTSWVCKVCETPDVDRECCLCPVKGGALKPTDVEMLWVHVTCAWFRPEVIFQNHETMEPAIGILKIPPNSFSKICIICKQSHGSCLSCCKCATYFHVMCASRAGYSMELHSMEKNGNQITKKLIYCAVHRVPKLDSVLVVHTPLGVFSPGTSFQNHKGCFRGSRLVSLKNVEHLEETSTAETCEDEPLSAARCRVYRRPLNKKADVSILHILKGPSRHSLSAITQLNSYKDAEHSKVFTSLKERLHHLQKTQKHQVCFGKSGIHGWGLFAHRDIQEGEMIAEYCGEQVRRSIADLREAKYRSEGKDCYLFKISEEVVIDATDKGNIARLINHSCMPNCYARIMSLGDEESRIVLIAKTNVSAGEELTYDYLFDPDEREELKVPCRCKASNCRKFMN | 1046 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dere11g1182 | 1046 | SUPERFAMILY | FYVE/PHD zinc finger | 427 | 487 | IPR011011 | - | |
Dere11g1182 | 1046 | ProSiteProfiles | Post-SET domain profile. | 1030 | 1046 | IPR003616 | - | |
Dere11g1182 | 1046 | PANTHER | PHD FINGER PROTEINS | 72 | 459 | - | - | |
Dere11g1182 | 1046 | SUPERFAMILY | Tudor/PWWP/MBT | 244 | 347 | - | - | |
Dere11g1182 | 1046 | CDD | PHD_TCF19_like | 430 | 480 | - | - | |
Dere11g1182 | 1046 | ProSitePatterns | Zinc finger PHD-type signature. | 614 | 659 | IPR019786 | - | |
Dere11g1182 | 1046 | Gene3D | - | 239 | 348 | - | - | |
Dere11g1182 | 1046 | SMART | PostSET_3 | 1030 | 1046 | IPR003616 | - | |
Dere11g1182 | 1046 | SMART | PHD_3 | 429 | 481 | IPR001965 | - | |
Dere11g1182 | 1046 | SMART | PHD_3 | 724 | 780 | IPR001965 | - | |
Dere11g1182 | 1046 | SMART | PHD_3 | 613 | 660 | IPR001965 | - | |
Dere11g1182 | 1046 | SUPERFAMILY | FYVE/PHD zinc finger | 612 | 675 | IPR011011 | - | |
Dere11g1182 | 1046 | ProSiteProfiles | Zinc finger PHD-type profile. | 427 | 483 | IPR019787 | - | |
Dere11g1182 | 1046 | CDD | SET_SETD1-like | 893 | 1042 | - | - | |
Dere11g1182 | 1046 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 420 | 487 | IPR013083 | - | |
Dere11g1182 | 1046 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 663 | 781 | IPR013083 | - | |
Dere11g1182 | 1046 | SMART | PWWP_4 | 246 | 315 | IPR000313 | - | |
Dere11g1182 | 1046 | Pfam | PHD-finger | 626 | 660 | - | - | |
Dere11g1182 | 1046 | SMART | set_7 | 904 | 1027 | IPR001214 | GO:0005515 | |
Dere11g1182 | 1046 | ProSiteProfiles | Extended PHD (ePHD) domain profile. | 665 | 780 | IPR034732 | - | |
Dere11g1182 | 1046 | CDD | PHD_ATX3_4_5_like | 613 | 659 | IPR042011 | - | |
Dere11g1182 | 1046 | FunFam | Histone-lysine N-methyltransferase | 663 | 782 | - | - | |
Dere11g1182 | 1046 | ProSiteProfiles | SET domain profile. | 904 | 1021 | IPR001214 | GO:0005515 | |
Dere11g1182 | 1046 | ProSiteProfiles | Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. | 3 | 1046 | IPR025780 | - | |
Dere11g1182 | 1046 | Pfam | PHD-finger | 429 | 482 | IPR019787 | - | |
Dere11g1182 | 1046 | Pfam | PHD-zinc-finger like domain | 667 | 779 | - | - | |
Dere11g1182 | 1046 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 608 | 662 | IPR013083 | - | |
Dere11g1182 | 1046 | Pfam | SET domain | 915 | 1020 | IPR001214 | GO:0005515 | |
Dere11g1182 | 1046 | ProSiteProfiles | Zinc finger PHD-type profile. | 611 | 662 | IPR019787 | - | |
Dere11g1182 | 1046 | FunFam | Histone-lysine N-methyltransferase | 878 | 1046 | - | - | |
Dere11g1182 | 1046 | Gene3D | SET domain | 822 | 1046 | IPR046341 | - | |
Dere11g1182 | 1046 | ProSiteProfiles | PWWP domain profile. | 248 | 317 | IPR000313 | - | |
Dere11g1182 | 1046 | Pfam | PWWP domain | 249 | 344 | IPR000313 | - | |
Dere11g1182 | 1046 | CDD | PWWP_AtATX3-like | 248 | 348 | - | - | |
Dere11g1182 | 1046 | SUPERFAMILY | SET domain | 897 | 1043 | IPR046341 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dere11g1182 | Dere-ChrDere11 | 22710759 | 22719226 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dere11g1182 | 387 | 454 | EF-hand Containing Proteins | AT5G28340 | 58.824 | 2.08e-21 | 96.7 |