Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1177 ATGGATGCCAAGGGACTAAAAGTTGTGAGGTTTAAGGATTGGAGTTCAGAATCATCTGTTAGTGTTGACAAGAAAAATTCTACTGATGATAAATATCATCAAAGAAAAGTTAGACCAAGAGTAAACGCTGCTTTTGAGAATATTAAAAGGAGACTCCAGAGAAGGTTTGAGAAGATAAATGTGCATCCAGTAAGTGATGCAACACCCAAGAAACTGGCTTCTAAGAGCAAAATTCTTGATCCACAGGGGTCTTTCCTTCAGAAATGGAACAAAATATTTGTGATCACTTGTGTAATGGCAGTCTCTGTGGACCCACTGTTCTTTTACATCCCAGTGATTGATGCAGAGAAAAAATGTCTTGATTTGGATAAAACATTGCAGATTACTGCTAGTGTTCTTCGTACATTCTTTGATCTTTTCTATGTTCTCCACATAATATTTCAGTTTCAAACTGGTTTTATTGCCCCTTCTTCTCGAGTGTTTGGTAGGGGTGAGCTCATTGATGATCCTCTGACTATTGCAAAAGGATACTTATCTTCATACTTCATCATTGACATTCTATCAATCATTCCACTTCCACAGGTGGTTGTTTTAGCTATCATTCCAATGAAACATTCTGCTCCATTTAAAAAAAAGGACTGGTTAAAGTATATAGTAATAATCCAGTATGTGCCAAGATTTCTTCAGATTTATCCATTATTCACAGAAGTAACTAGAACTTCTGGCATACTGACTGAGACAGCATGGGCTGGCGCTGCTTACAATCTCTTTCTCTATATGCTGGCAAGTCATGTCGTCAGGGCATTCTGGTACTTGTTTTCAGTAGAATCAGAGCTTCGGTGCTGGCACCAGGAATTGATGAGTGCTAATTCCCCTGTATTTACATACTTGAGCTGTGGACACCTGAATTCAGCTATCATTTCACTTCTCAATAGGTCTTGCCCCTACATTGATCCTGATGAAATTGTAGACCCAAGAAAGTTCAATTTTGGAATATTCATTGATGCTCTAAAATCTCATGTGGTAGAATCAACAACAGATTTTCCTCGGAAGATCTTCTACTGCTTTTGGTGGGGTTTACGCAATGTAAGTTCTCTGGGACAAAACCTCAAGACAAGTACATTTGTCTGGGAGATAATCTTTGCTGTCTTCATTGCAATTTTTGGGTTGGTTTTGTTCTCACTACTTATTGGAAACATGCAGAAATTTCTGCAATCTACAACTGTTAGAGTTGAAGAAATGAGGGTCAAGAGGCGGGATGCAGTGCAGTGGATGTCCCACCGAATGCTACCTGAGCACTTGAGGGAAAGATCAGACGAGAAGAGCGACATTGTTCGTGAAGGAGATCCAGTCAATGAAATGCTCTTTATTATGCGAGGAAACCTTGCTACCATGACAACAAATGATGGAAGAACTGGTTTTTTTAACTCCTTTGTTATTAAGGCTGGTGACTTCTGTGGAGAAGAGCTTTTAACATGGGCCTTGGACCCCAACTCATCCTCAAATCTTCCAATTTCAACCAGAACAGTTGAATCTATATCAGAAGTTGAAGCCTTTGCTCTCACGGCTAATGACTCGAAGTCTATTGCTTCCGAATTTCGACGCCTTCACAACAAACATATCCAGCACACTTTCAGGTACTACTCCTTGCAATGGAGGACATGGGCTGCTTGTTTCATACAAGTAGCTTGGCGTCGCCACTGCACAAAGAAGATTGAGAAATTACTAAGTGAAGCAGAGGACAGGCTACAAGATGCTTTGGCAAATGAGGAAGGGTCACCACCAAGTCTTGGTGCCACCATATATGCATCAAGGTTTGCTGCTAATGCATTACGAAACTTACAAAAAAATGGCGAGCTCAACAACATAAAGCCTCAGAGATTGCTGCCTCTACTGCCTCAGAAGCCAATTGAGCCTGATTTCACTACTCAAAGGCTTTAG 1941 0.4049 MDAKGLKVVRFKDWSSESSVSVDKKNSTDDKYHQRKVRPRVNAAFENIKRRLQRRFEKINVHPVSDATPKKLASKSKILDPQGSFLQKWNKIFVITCVMAVSVDPLFFYIPVIDAEKKCLDLDKTLQITASVLRTFFDLFYVLHIIFQFQTGFIAPSSRVFGRGELIDDPLTIAKGYLSSYFIIDILSIIPLPQVVVLAIIPMKHSAPFKKKDWLKYIVIIQYVPRFLQIYPLFTEVTRTSGILTETAWAGAAYNLFLYMLASHVVRAFWYLFSVESELRCWHQELMSANSPVFTYLSCGHLNSAIISLLNRSCPYIDPDEIVDPRKFNFGIFIDALKSHVVESTTDFPRKIFYCFWWGLRNVSSLGQNLKTSTFVWEIIFAVFIAIFGLVLFSLLIGNMQKFLQSTTVRVEEMRVKRRDAVQWMSHRMLPEHLRERSDEKSDIVREGDPVNEMLFIMRGNLATMTTNDGRTGFFNSFVIKAGDFCGEELLTWALDPNSSSNLPISTRTVESISEVEAFALTANDSKSIASEFRRLHNKHIQHTFRYYSLQWRTWAACFIQVAWRRHCTKKIEKLLSEAEDRLQDALANEEGSPPSLGATIYASRFAANALRNLQKNGELNNIKPQRLLPLLPQKPIEPDFTTQRL 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1177 646 Gene3D - 91 407 - -
Dere11g1177 646 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 66 438 - -
Dere11g1177 646 CDD CAP_ED 432 548 IPR000595 -
Dere11g1177 646 SUPERFAMILY Voltage-gated potassium channels 80 405 - -
Dere11g1177 646 ProSiteProfiles cAMP/cGMP binding motif profile. 429 501 IPR000595 -
Dere11g1177 646 SUPERFAMILY cAMP-binding domain-like 439 535 IPR018490 -
Dere11g1177 646 Gene3D Jelly Rolls 421 535 IPR014710 -
Dere11g1177 646 Coils Coil 569 589 - -
Dere11g1177 646 Pfam Ion transport protein 89 411 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1177 Dere-ChrDere11 22655712 22661094 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1177 1 643 Ion Channels AT5G53130 56.050 0.0 753