Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1176 ATGAAACGTTCAGTTTCATTTGTGGCCTTGGAATTGTTGAAGTATATAGTATTAATCCAGTATGTGCCAAGATTTCTTCGGATCTATCCACAATACAAGGGAGTAACAAGAAATCATGGAATATGGACTGAGACAGCATCGTTTGGTGCTATTTACAATTTCTGTCTGTATATGCTAGCAAGCCATGTGGTTGGAGCTCTCTGGTACCAATTTTCGTTAGAATCAGAGCTTCGATGCTGGCGTCGAGAATTGGAGAATGTTAATCTCTCTGCTCCAACATTCTTGAGCTGTAGACACCATAATTCAGCTGTCATTTCACTTCTTAATAGCTCTTGCCCCTTCGCTGATCCTGATGACATTGATGACCACAAAGACTTCAATTTTGGAATATTTATCGATGCTCTCAGATCTCGTGTGGTAGAATCAAAAACAAATTTTCCTCAGAAGTTCTTCTACTGCTTTTGGTGGGGTTTGCGCAATATAAGTTCACTCGGACAAAACCTAAAGACAAGTACATCTGTTGAGGAAATCATCTTCACTATCTTCATCGCCATCTTCGGATTGGTTTTGTTCTTATTACTTATCGGAAACATGCAGAAATACATGCAATCTATGCAAACTACAACTAATAGAACCGAAGAAATGAGAATCAAAGCTGGAGAAATGAGAATCAAAAGGGAGTATGCTGAACTGTGGATGTCCCACCATATGCTCCCTGAGCACTTGAGGGAAAGATTCAGACGGTACGAACATTACAAATGGCAAGAACATAGGAGTGTTGAGGAGGAAGCACTAATAGACAAGATGCCAAAAGATCTCAGAAGAGACATAAAGCGTCACCTTGCCTTTCATTTGCTTAAAACAGTGGAATCGATATCAAAAGTTGAAGCCCTTGCTCTCATGGCGGATGACTTGAAGATCGTTATTTCCCATAACCTTGGCTACAAACATACGGGGCACACTTTGACTAGGTACCATTCCTTGCAATTGAGGACAAGGGCTGCCTGTTCCGTACAAGCAGCCTGGCGTCGCTACTGCAAAAAGAAGATTGAGAGGTCACTAGTTGAGGCAGATAAGCTGTAA 1083 0.4127 MKRSVSFVALELLKYIVLIQYVPRFLRIYPQYKGVTRNHGIWTETASFGAIYNFCLYMLASHVVGALWYQFSLESELRCWRRELENVNLSAPTFLSCRHHNSAVISLLNSSCPFADPDDIDDHKDFNFGIFIDALRSRVVESKTNFPQKFFYCFWWGLRNISSLGQNLKTSTSVEEIIFTIFIAIFGLVLFLLLIGNMQKYMQSMQTTTNRTEEMRIKAGEMRIKREYAELWMSHHMLPEHLRERFRRYEHYKWQEHRSVEEEALIDKMPKDLRRDIKRHLAFHLLKTVESISKVEALALMADDLKIVISHNLGYKHTGHTLTRYHSLQLRTRAACSVQAAWRRYCKKKIERSLVEADKL 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1176 360 Pfam Ion transport protein 16 209 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Dere11g1176 360 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 287 353 - -
Dere11g1176 360 Gene3D Helix hairpin bin 220 281 - -
Dere11g1176 360 SUPERFAMILY Voltage-gated potassium channels 21 256 - -
Dere11g1176 360 Gene3D - 4 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1176 Dere-ChrDere11 22637932 22641059 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1176 287 358 Ion Channels AT2G46430 40.541 2.89e-10 59.7