Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1172 ATGGGATGCATACCACAATCATCAGCATTCTCAAACCTCGAATCAATCTCAGTAGCAGCAGAGTTGGAAGATAATGGAGAAGCAATTTTGTGTTCGTATGCTTCATGGCTAGGAAAGCATCCCTCTGCATTAGAAAAGTTTGAGGAAATGATGAGCATTGCTAAAGGGAAAGAGGTTGTTGTGTTTTTGGACTATGATGGAACCCTCTCTCCCATTGTAGATGATCCTGATCAGGCTAACATGAGTGATGTTATGCGCACAGCAGTAAATGAAGTTGCATGTTGTTTTCCTACTGCAATTGTCAGTGGAAGGAGTAGAAAAAAGGTATATGAATTTGTGAAGTTAAGGAATGTATACTATGCTGGAAGTCATGGGATGGATATATCAACCCCAATAGGCTCTTCAAAATCTGAAGACCAAAACCATCAGACAAAGGCTGTTGATGAAAGGGGTAATCAAGTTGTTCACTTTCATCCTGCAAAAGAATTTCTACCCACAATCCAGGAGATAATTCAAATTTTGAAAGAAAAAGTTTTAAGAATTAAGGGCTCCAAGGTGGAAGATAATTTGTTCTGCATCACTGTACACTACAGGCTAGTGAAAAATGAAAAGGAAGTTGGTATTCTCAGAGAGATGGTGGAGTCTATCATAGAAGCTTACCCCAATTTTCACATATCAGGAGGAAGAAAGGTTATTGAGATACGGCCAAATATAAATTGGGATAAAGGTTGTGCTCTGCAGTATTTACTTGGCACTTTTGGCTTCGACAGCTTTAACAATGTTTTACCAGTGTACATAGGAGATGACAGAACTGATGAAGATGCTTTTGAGGTTATAAGACACATTGGACAAGGTTTTCCAATCATTGTTTCTTCAAAAGCCAAGAAGACCAAAGCTTCTTATTCTCTGCGAGATCCAGCTGATGTTTTGTCTTTCTTAATACGTCTAGCTAAGTGGAAGAAAAGCTTGTCATAG 975 0.3877 MGCIPQSSAFSNLESISVAAELEDNGEAILCSYASWLGKHPSALEKFEEMMSIAKGKEVVVFLDYDGTLSPIVDDPDQANMSDVMRTAVNEVACCFPTAIVSGRSRKKVYEFVKLRNVYYAGSHGMDISTPIGSSKSEDQNHQTKAVDERGNQVVHFHPAKEFLPTIQEIIQILKEKVLRIKGSKVEDNLFCITVHYRLVKNEKEVGILREMVESIIEAYPNFHISGGRKVIEIRPNINWDKGCALQYLLGTFGFDSFNNVLPVYIGDDRTDEDAFEVIRHIGQGFPIIVSSKAKKTKASYSLRDPADVLSFLIRLAKWKKSLS 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1172 324 Gene3D - 173 324 IPR023214 -
Dere11g1172 324 Gene3D - 59 154 IPR023214 -
Dere11g1172 324 Pfam Trehalose-phosphatase 62 306 IPR003337 GO:0003824|GO:0005992
Dere11g1172 324 CDD HAD_TPP 60 309 - -
Dere11g1172 324 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 28 322 IPR044651 GO:0004805|GO:0005992
Dere11g1172 324 NCBIfam HAD-IIB family hydrolase 61 283 IPR006379 -
Dere11g1172 324 SUPERFAMILY HAD-like 60 319 IPR036412 -
Dere11g1172 324 NCBIfam trehalose-phosphatase 57 317 IPR003337 GO:0003824|GO:0005992
Dere11g1172 324 FunFam Trehalose 6-phosphate phosphatase 160 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1172 Dere-ChrDere11 22520198 22524926 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1172 55 313 Trehalose Biosynthesis Gene Families AT1G70290 25.547 2.77e-08 53.5