Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1166 ATGGAAGCCCTCAATGCTGCTACCTTGACCCCTTTATCTGTGCTCTGCGATAGAAGGGAAAAACTTCGAAAGTTTTCATCGCTACCCAGAATTTCCACCAGCAAAGTGTCAGATTCTTCTAGTTTTTCCCGCAAGAAACCATCTCTGAAAGAGCATTTACGTTCAGATTTACGTGGGGGTCTTCTGCTTGCAGCTTCAATTGTCAATGGCGGAATTGCTAGAGCTCTAACATATGAGGAAGCATTACTGCAATCTGCGAGTAGTTCTAGTTCTGGGAATGTTGATGCAAATGGGATTGTAGATAGTGTTATAAATTTTGGAACAGAGAACGCTGTGCTTATAGCCGGAGGGTTAGCTATTTTGGGGGTGTCTCTGGTTTTGTCTAAGGTTCTAAACAAGCCTAAGCCATGGGGTGTTGAATCAGCCAAAAATGCATTTGCAAAGCTTGGTGCTGACGGGTATGCTCAATTGCTTGATATAAGAGCTCCGATAGAGTTTAGGCAAGTAGGTACCCCAGACATTGGGGGTTTGAGGAAGAAGCCAGTGTCAATCACTTACAAAGGTGACGATAAACCAGGGTTTTTGAAGAAGCTGCCTTTGAAGTTTAAGGAACCAGAAAATACCACATTGTTCATTCTGGACAAATTTGATGGGAACTCCGAATTGGTTGCAGAGTTGGCCACAGTTAATGGATTCAAAGCTGCTTATGCAATTAAGGATGGTGCAGAAGGACCACGAGGATGGATGAGCAGTGGTCTTCCTTGGACACCACCAAGGAAAGCATTGAGTTTGGATCTTGGCAATTTGACAGAATCTATCACTGGTGCTATAGGAGAGACCTCTGATGGCTTGGCTGTTACTCTTGGGCTTGCTGCTGCTACTGGACTTGGGCTCTTAGCTTTTACTGAGATAGAAACAATTCTCCAACTTTTAGGCTCAGCTGCAATTGTTCAGTTTGCAAGCAAGAAGCTTCTATTTGCAGAGGATCGAAAGGAAACTCTACAACAAGTTGATGAGTTCTTAAATACAAAGGTTGCCCCGAAAGAGCTTGTTGATGAGATAAAGGAAATTGGAAGGGCTCTTCTACCAATCTCCAGCAGTAGTAAGGCTCTTCCTGCACCAGCAGAGAAAACCCCAGAACCTGCACCTGCTTCCAGCACTGTACAGAAAGCAGAAGCCTCTTCTGACACAGTCTCTGAGTCCAAAGTAGAAGCAGTAGCAGAACCTGCTCCTGAAATAAATTCAGTACCCAAACCTGAAGCTAAGGCAGAATCACTTCCTGGGTTACCAAAGCCTCTTTCACCATACCCATATTATCCGGATTTCAAGCCTCCAACATCTCCCACTCCTTCGCAGCCCTAG 1362 0.4471 MEALNAATLTPLSVLCDRREKLRKFSSLPRISTSKVSDSSSFSRKKPSLKEHLRSDLRGGLLLAASIVNGGIARALTYEEALLQSASSSSSGNVDANGIVDSVINFGTENAVLIAGGLAILGVSLVLSKVLNKPKPWGVESAKNAFAKLGADGYAQLLDIRAPIEFRQVGTPDIGGLRKKPVSITYKGDDKPGFLKKLPLKFKEPENTTLFILDKFDGNSELVAELATVNGFKAAYAIKDGAEGPRGWMSSGLPWTPPRKALSLDLGNLTESITGAIGETSDGLAVTLGLAAATGLGLLAFTEIETILQLLGSAAIVQFASKKLLFAEDRKETLQQVDEFLNTKVAPKELVDEIKEIGRALLPISSSSKALPAPAEKTPEPAPASSTVQKAEASSDTVSESKVEAVAEPAPEINSVPKPEAKAESLPGLPKPLSPYPYYPDFKPPTSPTPSQP 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1166 453 MobiDBLite consensus disorder prediction 369 453 - -
Dere11g1166 453 MobiDBLite consensus disorder prediction 430 453 - -
Dere11g1166 453 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC 1 453 IPR044240 -
Dere11g1166 453 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 139 257 IPR036873 -
Dere11g1166 453 MobiDBLite consensus disorder prediction 382 401 - -
Dere11g1166 453 FunFam Rhodanese-like domain-containing protein 4, chloroplastic 135 266 - -
Dere11g1166 453 Gene3D - 137 267 IPR036873 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1166 1 443 Sulfurtransferasese or Rhodanese AT4G01050 55.462 5.92e-156 450
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere11g1166 11 22428973 22432709 Dere11g1166 11 22428973 22432709 ECH