Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1162 ATGGCCAAACGTCGCAGAAAGGCTAGTAGCTCCTACTCTGAAGAGGTGAGCAGCATTGAGTGGGAGTTCATTAATATGTCAGAGCAAGAAAAAGATCTAATTCACAGAATGTACAGACTTGTTGGAGATAGGTGGGGTCTGATAGCAGGGCGCATTCCGGGACGAAAAGCTGAAGAGATAGAGAGGTTTTGGATTATGACATACGGCAACCTCTTTTCCAGCAAAAGAGATGAACAACACAAGAAACGCTGGAAATAA 258 0.4419 MAKRRRKASSSYSEEVSSIEWEFINMSEQEKDLIHRMYRLVGDRWGLIAGRIPGRKAEEIERFWIMTYGNLFSSKRDEQHKKRWK 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1162 85 SMART sant 22 70 IPR001005 -
Dere11g1162 85 FunFam MYB-like transcription factor 25 67 - -
Dere11g1162 85 CDD SANT 25 64 IPR001005 -
Dere11g1162 85 Gene3D - 27 85 - -
Dere11g1162 85 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 25 72 - -
Dere11g1162 85 SUPERFAMILY Homeodomain-like 27 67 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1162 Dere-ChrDere11 22377892 22380556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1162 26 64 MYB Transcription Factor Family AT5G52600 58.974 2.58e-12 57.8