Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1160 ATGGAAGAGACTAAGAAGTGGGGACAACTTAGTCTGATCGGTGAGCTAGTCCAAGGGAAGGAGCTAGCAAAGCAGCTCTGTGCCCAACTTCTTTCTTCCTCTTCTTCATCTCATGAAGAGAAGGAGCTCTTACTCGAGAAAATCCTTTCATCCTATGAGAAAGCACTGTCCATGCTAAATAGGAGAGCTAATGTGGGAGAGACTAAGACCATCGCTGGCAAGATGGTGGATTCTCACTGTTCTTTTACGGGTGGGAGCCCCAGAAGTGAGGTTTCGGACCAGGATTTCAAGCACAAAGATTCCTTCAAGAAAAGAAAGAACTTGCCCAGATGGACAAAGCTAGTGAAGGATTGTCAAGGAACAGGGCCTGAAGGGTCTGTGGATGATGGCTATAGCTGGAGAAAATACGGGCAGAAGGAAATTCTTGGAGCCAAGTTTCCCAGAGGATATTACAGATGCACTCACAGAAACGTACAAGGCTGCCTGGCCACAAAGCAAGTTCAAAGATCAGATGAAGATCCAAAAATTCTTGAAATAACCTACAGAGGGAGACACACATGCACCCTAGCATCTCATCGGAACAAGGCATTACCATTAAAAAGAAAGATGGGATTAGTGGAAAATCAACAACAAAAGCGTCAAAATAATCAACCACATGAAGACATACCACTAGAACAAAACCCAGAAGCATTTTTCAATTACGGAGCAGAGGTTGAAGTTAAAACAGAGGATTTTGACTCCAAGGAGGACATTTTCCCACCCTTCTGCTTCGCTTCTCCATCTATGGGATCTGAAAATGAGGACAACCTTTTATTCATTGAGACCATGATGGACAACCATTTCCTGGAAAGCCTTTCTTCTCCCAAGTTTATCTCACCAGCAACCTCGGAAACAAACATTTTCTGTCTGAATGTGCAGACTTCAGAATCTGATGTCACTGACATAGTTTCAGCTCCAACTTCAGTCACCAATTCCCCAATAGTTGATTTGGATCTCTTAGATTTTGACTCGAATTTCCCTTTCAACGCCCCAGAACTTTTCTCTTTATAA 1050 0.4324 MEETKKWGQLSLIGELVQGKELAKQLCAQLLSSSSSSHEEKELLLEKILSSYEKALSMLNRRANVGETKTIAGKMVDSHCSFTGGSPRSEVSDQDFKHKDSFKKRKNLPRWTKLVKDCQGTGPEGSVDDGYSWRKYGQKEILGAKFPRGYYRCTHRNVQGCLATKQVQRSDEDPKILEITYRGRHTCTLASHRNKALPLKRKMGLVENQQQKRQNNQPHEDIPLEQNPEAFFNYGAEVEVKTEDFDSKEDIFPPFCFASPSMGSENEDNLLFIETMMDNHFLESLSSPKFISPATSETNIFCLNVQTSESDVTDIVSAPTSVTNSPIVDLDLLDFDSNFPFNAPELFSL 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1160 349 Gene3D WRKY domain 116 190 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere11g1160 349 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 6 276 IPR044810 GO:0003700
Dere11g1160 349 Pfam WRKY DNA -binding domain 128 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere11g1160 349 SMART WRKY_cls 127 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere11g1160 349 FunFam WRKY transcription factor 53 113 190 - -
Dere11g1160 349 ProSiteProfiles WRKY domain profile. 122 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere11g1160 349 SUPERFAMILY WRKY DNA-binding domain 126 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1160 Dere-ChrDere11 22358216 22360367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1160 16 215 WRKY Transcription Factor Family AT5G24110 44.500 6.58e-49 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere11g1160 WRKY 2.4e-27 CL0274