Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1154 ATGGAGCAATTTCGACATGTTGGGGAGGCACTTGGAGGTTTGAAGGCTCTCATGGTATTCAGAGAAAATATCCAATTCAATCAGAGGCAGTGTTGTTTGTTGCTGGATGTCTTCATCTTTGTATATGATTCAATTGCAGAGGAGATTACTAGTAACCTGATATTCGCCGAAAAGCACACAAAGTGGAAAGTTCTTGAACAGCCATTGAAAGAGATTCACAAGATCATCAAAGAAGGAGAAGCTTACATCAAGCAATGCTTGGAAAGTCAAACAAAGGACTGGTGGGCCAAAGCCATTACACTCTACAAGAACAAAGACTGTGTTGAGTTTCACATCCACAACTTGCTTTCTTGCATTCCTGTTGTCATTGAAGCAATTGAATCTGCAGCAGAAACAGCAGGGCGGGATCAGGAAGAGATGGAAAGAAAGAGGCTTATCAACTCTAACAAATACAGGAAAGAATACAAGGACATGAGCCTTTTCCAGTGGAAATTTGGAAAGCAGTACCTCATTACTCAGGATTTCTACCATCGTTATGACACAGTTTGGAAGGAAGATAGATGGTTCCTTCTCAACAAAATCCGTGAAAAGAAACTGGCAATTTCAGCAAAGTACGAGAACAGATTAACAGATTTTCTTTTAAAAACATTAGAAGAATCAGGATCATTCGGTGTGGACCTACTTCCTAGTACAATTTTGGTGGGGTCCAAGGACTACCAGGTGAAGAGAAGACTAGGAAATGGGAGCTTGTACAAGGAGATTATATGGTTAGGTGAAAGCTTTGCTGTAAAGCATTTTTTTGGGGACATAGAAGCAATGGAACCAGAGATCACATCCTTTCTATCTCTGTCCCACCCAAATATAATGGAATGCCTATGTGGGTTTTGTGATGAGGAGAAGAAAGAGTGTTTTCTGCTAATGGAACTAATGAGCAGAAGCCTCTGCACCCATATTACAGAGGTTAATGGCCCAAAAAAGCAAGTTCCATTTGCACTTCCTGTAGCGGTTGATCTTATGCTTCAAATTGCCAGAGGAATGGAATACCTGCATTCAAAGAAAATATATCATGGAGAGCTAAATCCCTCAAACATTCTTGTCAAACCCAGAGGTACATTCACAGAAGGCTACTTGTATGCCAAGGTTTCTGGGTTTAGCCGAGTTGGTGTTAAGGATTTGAAACAAAAAGGGACCACAAATCAGAATGAAACCTTCCCATTTATCTGGTATGCACCTGAAGTTCTTGAAGAGCAGGAACAGATGGGAGATACTATAAACTCCAAGTATACAGAGAAATCTGATGTTTACAGTTTTGGAATGGTTTGCTTTGAGCTCCTAACTGGTAAAGTCCCTTTTGAGGATAATCATCTTCAAGGGGACAAAATGAGCAGAAACATAAGGGCAGGAGAGAGACCGCTTTTCACATACGGTTCTCCAAAATATGTTACTAACTTGACTAAGAAATGTTGGAATGCTGATCCAAATCAAAGGCCAAGCTTCTCCTCCATCTGTAGAATTCTGCGGTATGTAAAACGGTTTCTTGTTTTGAATCCTGATTACAATAGCCCACTAGAACCACCAGTGCCACCAGTAGATTACTGCGATATAGAGTCAACACTCTTGAGGAAGTTCCCTTCTTGGGGAACTTCTGATGCATCACCAATATCTCATATTCCATTTCAAATGTTTTCCTATCGAGTCATAGAAACTGAAAAGATAAGTTTAAGCACCAATTATAACTCTGAATCTGGAAGCGATGTTTCAGCCTGTGGTGATGAACTTGTTACCTCTGGGGAAGAATTATATCCATCAAGAATTGACAAGAAGTCTTTAATTGGACGAGATGGTATAACAATGAATAGGAGATACTCACCATCAAGGAGATCCTTCGATTCAAGGGCCAGCAAACAACCAGGAACACCGAAAGGACGATCTCCTAGACCTCCGCATATGGCTCCCTCTGGGAGAAGCATGACGATTAGATCAGAAACTCCAATGATGGCAAGTCCAAGAATGAGAAGGACAGCTTCTGGTCATGTCTCAGACTCTGAGCTTCCTTTGATCTCAGCAAACCACCATCAAATTTTCAACATAAAATTTAGACACCATGCAGATATCTTGATAGCTCTAAACTCCACCCATTTACAAAGCATGTTCACATAG 2160 0.4079 MEQFRHVGEALGGLKALMVFRENIQFNQRQCCLLLDVFIFVYDSIAEEITSNLIFAEKHTKWKVLEQPLKEIHKIIKEGEAYIKQCLESQTKDWWAKAITLYKNKDCVEFHIHNLLSCIPVVIEAIESAAETAGRDQEEMERKRLINSNKYRKEYKDMSLFQWKFGKQYLITQDFYHRYDTVWKEDRWFLLNKIREKKLAISAKYENRLTDFLLKTLEESGSFGVDLLPSTILVGSKDYQVKRRLGNGSLYKEIIWLGESFAVKHFFGDIEAMEPEITSFLSLSHPNIMECLCGFCDEEKKECFLLMELMSRSLCTHITEVNGPKKQVPFALPVAVDLMLQIARGMEYLHSKKIYHGELNPSNILVKPRGTFTEGYLYAKVSGFSRVGVKDLKQKGTTNQNETFPFIWYAPEVLEEQEQMGDTINSKYTEKSDVYSFGMVCFELLTGKVPFEDNHLQGDKMSRNIRAGERPLFTYGSPKYVTNLTKKCWNADPNQRPSFSSICRILRYVKRFLVLNPDYNSPLEPPVPPVDYCDIESTLLRKFPSWGTSDASPISHIPFQMFSYRVIETEKISLSTNYNSESGSDVSACGDELVTSGEELYPSRIDKKSLIGRDGITMNRRYSPSRRSFDSRASKQPGTPKGRSPRPPHMAPSGRSMTIRSETPMMASPRMRRTASGHVSDSELPLISANHHQIFNIKFRHHADILIALNSTHLQSMFT 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1154 719 MobiDBLite consensus disorder prediction 621 638 - -
Dere11g1154 719 FunFam Kinase family protein 236 519 - -
Dere11g1154 719 Gene3D Transferase(Phosphotransferase) domain 1 226 514 - -
Dere11g1154 719 MobiDBLite consensus disorder prediction 615 678 - -
Dere11g1154 719 Pfam Protein of unknown function (DUF1221) 21 236 IPR010632 -
Dere11g1154 719 Coils Coil 123 143 - -
Dere11g1154 719 PANTHER SERINE-THREONINE PROTEIN KINASE 250 509 - -
Dere11g1154 719 SUPERFAMILY Protein kinase-like (PK-like) 232 536 IPR011009 -
Dere11g1154 719 ProSiteProfiles Protein kinase domain profile. 239 513 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g1154 719 Pfam Protein tyrosine and serine/threonine kinase 271 505 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1154 Dere-ChrDere11 22289376 22293001 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1154 238 513 MAP Kinase Kinase Kinase AT1G14000 30.345 2.94e-24 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Dere11g1154 PK_Tyr_Ser-Thr 8.3e-37 CL0016