Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1130 ATGGGAAACAGTGAGGAAAAGAAATCTGCTAAAACTGAAAAACCTTCTTTGCCTGCAACAGTGGACCAGACTAATCAGAGCAGCCAGACCAATATTCATGTCTGTCCTGATTGGGCGGTCATGCAGGCATATTATGGGCCAAGAGTCTCCATACCACCATACTACAACTCAGCTGTGGGTTCTGGTCACGCCCCTCATCCATATATGTGGCCACCACAGCCTATGATGCCACCACCATATGGGGCGCCTTATGCAGCAATGTATTCGCACGGAGGTGTTTATCCTCACCCTGCGGTTCCTATTGGGCCACAATCACATGGTCAAGGAGTTCCAACCTCACCTATAGCTGGAACTCCGTTGAGCTTAGAGACACCAACCAAATCTTCTGGAAACACAGATCAGGGTTTAATGAAGAAATTGAAGGGGTTCAATGGGCTTGCAATGTCAATTGGAAATGGCAATGCTGAGACCGCTGAGCGTGGAGCTGAAAACAGGCTGTCACAGAGCTTGGATACTGAGAGTTACAGTGATGGAAGTGACAGCAACACGGCAAGGGCTAATCAAACAAGAAGGAAAAGAAGCCGTGAGGGAACACCAGCCACTGATGGAGATGGGAAAGCTGAGATACAAGCCACTCCGGTTTCCAAAGTGGCTGCAGCTTCCAATAAGTTGATATCAAATGTCTCGGCCAGTGTTGCAGGTACAGCAGTTGGACCTGTAGTTTCCTCAGGTATGACAACGGCATTGGAGCTGAGGAACCTGCCAGTATTTTCCAAGGCAAATTCCACAAGTAACCCGCAACCTTGTGTGGTAGTGCCTCCTGAAGCTTGGTTACAGAATGAACGCGAGCTGAAACGAGAAAGGAGAAAGCAATCAAATCGGGAATCTGCTAGAAGGTCCCGGCTAAGGAAGCAGGCTGAGACTGAAGAACTCGCAGGAAAAGTTGAATCCTTGACATCTGAGAATGTGACACTGAAATCAGAAATAAACAGATTGACTGAAAGTTCTGCAAAACTTAAGATGGAGAATGACACATTAGTGGAAAAACTGAAAAATGCACGAGGACAAAAAGAAGAAATCGTTTTGATGGGCGTTGACAGCCAGAGGGCCATACCTAGTACAGAAAACTTACTATCCAGGGTTAACAATTCGAGTTCTAATGATAATAGAACTGTGGAGGGTGAGAATGCTTTCTGTGAGAAGAAGCCAAATTCAGGAGCAAAGCTGCATCAACTACTGGATACGAGTCCTAGGGCTGATGCTGTGGCAGCTGGCTGA 1278 0.4687 MGNSEEKKSAKTEKPSLPATVDQTNQSSQTNIHVCPDWAVMQAYYGPRVSIPPYYNSAVGSGHAPHPYMWPPQPMMPPPYGAPYAAMYSHGGVYPHPAVPIGPQSHGQGVPTSPIAGTPLSLETPTKSSGNTDQGLMKKLKGFNGLAMSIGNGNAETAERGAENRLSQSLDTESYSDGSDSNTARANQTRRKRSREGTPATDGDGKAEIQATPVSKVAAASNKLISNVSASVAGTAVGPVVSSGMTTALELRNLPVFSKANSTSNPQPCVVVPPEAWLQNERELKRERRKQSNRESARRSRLRKQAETEELAGKVESLTSENVTLKSEINRLTESSAKLKMENDTLVEKLKNARGQKEEIVLMGVDSQRAIPSTENLLSRVNNSSSNDNRTVEGENAFCEKKPNSGAKLHQLLDTSPRADAVAAG 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1130 425 SMART brlzneu 281 345 IPR004827 GO:0003700|GO:0006355
Dere11g1130 425 CDD bZIP_plant_GBF1 286 334 IPR045314 GO:0003700|GO:0006355
Dere11g1130 425 MobiDBLite consensus disorder prediction 106 135 - -
Dere11g1130 425 MobiDBLite consensus disorder prediction 379 425 - -
Dere11g1130 425 MobiDBLite consensus disorder prediction 379 393 - -
Dere11g1130 425 MobiDBLite consensus disorder prediction 282 313 - -
Dere11g1130 425 MobiDBLite consensus disorder prediction 186 202 - -
Dere11g1130 425 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 283 346 IPR004827 GO:0003700|GO:0006355
Dere11g1130 425 FunFam G-box binding factor 3 284 339 - -
Dere11g1130 425 MobiDBLite consensus disorder prediction 1 29 - -
Dere11g1130 425 Pfam bZIP transcription factor 281 343 IPR004827 GO:0003700|GO:0006355
Dere11g1130 425 MobiDBLite consensus disorder prediction 100 137 - -
Dere11g1130 425 MobiDBLite consensus disorder prediction 282 311 - -
Dere11g1130 425 Pfam Disordered region downstream of MFMR 133 255 - -
Dere11g1130 425 Pfam G-box binding protein MFMR 1 100 IPR012900 -
Dere11g1130 425 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 390 IPR044827 GO:0003700|GO:0006355|GO:0043565
Dere11g1130 425 MobiDBLite consensus disorder prediction 161 185 - -
Dere11g1130 425 MobiDBLite consensus disorder prediction 156 209 - -
Dere11g1130 425 SUPERFAMILY Leucine zipper domain 284 340 IPR046347 GO:0003700|GO:0006355
Dere11g1130 425 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 288 303 IPR004827 GO:0003700|GO:0006355
Dere11g1130 425 Coils Coil 315 356 - -
Dere11g1130 425 Gene3D - 284 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1130 Dere-ChrDere11 22022176 22026744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1130 1 425 bZIP Transcription Factor Family AT2G46270 51.044 8.49e-116 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dere11g1130 MFMR_assoc 6.2e-19 No_clan